RA ae: SRG eRe tte So ee as ee aa S B : x ‘seh Soe (ere her seer Sees Seen SSS ws Cornell University Library OF THE DEP PPT ei aR OY Hew Work State College of Agriculture PRS. Lacatct occ. ST Y. Cornell University Library QR 41.F52 iii 03 200 106 The structure an 3 1924 0 li mann Cornell University The original of this book is in the Cornell University Library. There are no known copyright restrictions in the United States on the use of the text. http://Awww.archive.org/details/cu31924003200106 THE STRUCTURE AND FUNCTIONS OF BACTERIA HENRY FROWDE, M.A. PUBLISHER TO THE UNIVERSITY OF OXFORD LONDON, EDINBURGH, AND NEW YORK THE STRUCTURE AND FUNCTIONS ele BACTERIA BY ALFRED FISCHER PROFESSOR OF BOTANY AT THE UNIVERSITY OF LEIPZIG TRANSLATED INTO ENGLISH BY A. COPPEN JONES Orford AT THE CLARENDON PRESS 1900 PRINTED AT THE CLARENDON PRESS BY HORACE HART, M.A. PRINTER TO THE UNIVERSITY AUTHOR'S PREFACE SEEING that there is at the present time no lack of treatises upon bacteria, the publication of yet another needs some apology. Such an apology is expressed in the title, Lectures on Bacteria*. The lectures are intended to be an introduction to general bac- teriology. They purpose to give a survey that shall collect and condense the innumerable special researches into a connected whole, and indicate in broad outlines the present position and extent of bacteriological science. Besides those medical aspects of bacteriology which in other treatises occupy, rightly enough, the chief place, attention is drawn to the importance of bacteria in agriculture, and to the parts they play in the great fundamental processes of life—the circulation of nitrogen and carbon dioxide. Furthermore, it seemed desirable to point out and emphasize the advancement that general physiology has received from bacteriological investigations. Finally, an attempt has been made to remove the bacteria from the isolated position to which their morphological and physiological pecu- liarities had relegated them, and, by comparative studies, to indicate their relations to other organisms. A treatment of the subject on these lines that should be at the same time not too bulky, seemed to me to be wanting. I there- fore undertook the publication of the course of lectures I have delivered for some years to students of biology, pharmacy, and agriculture, with here and there among them—as it were like a white raven!—a medical student. ALFRED FISCHER. LEIPZIG, 22 July, 1897. * The title of the German work is Vorlesungen tiber Bakterien. TRANSLATOR’S PREFACE In offering to English readers a translation of Professor Alfred Fischer's Vorlesungen iiber Bakterien, an Introduction is rendered almost unnecessary, in the first place by the favourable reception of the original German edition, and secondly, by the fact that no work on Bacteriology of similar scope and mode of treatment has appeared in England since De Bary’s classical Lectures on Bacteria, But those Lectures were published in 1887, and the twelve years that have passed since then have been years teeming with activity in every field of bacteriological research. The present work epitomizes, in a comparatively small space, the results of these investigations, and attempts to elucidate them in their relations to the many-sided problems of Pathology, and of Technical and Agricultural Chemistry, and the great chemical processes of nature. It should be stated that the few variations from the original that occur have been made with the Author’s sanction, and that, furthermore, the book has enjoyed the advantage of a proof- revision by Professor Marshall Ward of Cambridge. The Index is the work of Dr. Alfred J. Ewart. ASC). Davos PLatz, March 13, 1900. CONTENTS CHAPTER I PAGE INTRODUCTION: MORPHOLOGY Form, Size, and Structure of the Bacterial Cell, Cell-membrane and Cell-contents Morphology of the Bacterial Cell . . : : ‘ F a ‘ , ‘ 2 2 Finer Structure of the Bacterial Cell CHAPTER II MORPHOLOGY (continued) Pigments, Intracellular Products ; Movement and Organs of Locomotion; Cell-division; Spore- formation and Germination . ; é ‘ ‘ : ‘i , : : 4 ae Movements and Organs of Locomotion . : ‘ : : ; ‘ ‘ 2 ‘ - 14 Reproduction of Bacteria by Fission . ' , ; : ‘ , ‘ » 16 Spores and Sporulation ‘ : : 4 ; ‘ ‘ : : » 19 CHAPTER III TAXONOMY The Question of ‘Species’ among Bacteria; Variability; Involution and Attenuation; the Classification of Bacteria ‘ é : ‘ : ‘ ‘ , ‘ . ‘ « 24 CHAPTER IV TAXONOMY (continued) The Systematic Position of Bacteria; Other low Organisms with Pathogenic Properties . - 35 CHAPTER V ' DISTRIBUTION AND ORIGIN Distribution of Bacteria ; Their modes of life; Spontaneous Generation . , ‘ : Ad CHAPTER VI PHYSIOLOGY OF NUTRITION AND GENERAL PRINCIPLES OF CULTURE Chemical Composition of Bacteria ‘ 4 ‘ : F ‘ : F ‘ : 52 Food Stuffs of Bacteria . 5 : : ‘ Z ‘ 2 : : ‘ i 83 CHAPTER VII RESPIRATION OF BACTERIA Aerobiosis and Anaerobiosis; Light-producing Bacteria; Marine Bacteria; Sulphur and Iron Bacteria : . . - F s 2 : : i ‘ . ; : . 60 CHAPTER VIII INFLUENCE OF PHYSICAL AGENTS Light, Electricity; Pressure, Temperature, Dryness and Moisture ; Disinfection by means of Physical Agents. : s z 2 ' ; . . . : - 71 CHAPTER IX THE ACTION OF CHEMICALS Chemotaxis and Chemical Disinfection . ‘ ‘ 7 . : ‘i i ‘ . 78 vili CONTENTS CHAPTER X PAGE BACTERIA AND THE CIRCULATION OF NITROGEN IN NATURE 1. Introduction: The Assimilation of Free Nitrogen by the Bacteria of the Root Nodules of Leguminous Plants, and by Bacteria inthe Soil . ; . i . » + 88 CHAPTER XI BACTERIA AND THE CIRCULATION OF NITROGEN (continued) 2. The Liberation of Organic Nitrogen by Putrefaction, and its Mineralization by the Nitri- fying Bacteria : F ; : ; : ‘ ‘ : : , : - 98 CHAPTER XII THE CIRCULATION OF CARBON DIOXIDE IN NATURE 1. Introduction ; Organized Ferments and Enzymes; Races of Ferment Organisms ; Fermen- tation of Alcohol and of Acids; Optical Activity and Fermentation : : : » 107 CHAPTER XIII THE CIRCULATION OF CARBON DIOXIDE IN NATURE (continued) 2. Bacterial Fermentation of Carbohydrates . : ‘ : ‘ ‘ 3 . i . 116 Milk and other Dairy Products. ‘ : : ; : : : ‘ a ee) © 6 Butyric Fermentation . : ‘i ‘ F ‘ : : ; ; : . 12i Cellulose Fermentation . . : : A : : : ‘ 7 c . 122 Mucilaginous Fermentation ‘ 5 3 . . 123 Fermentations in technical processes. . : ‘ : é : : : . 123 CHAPTER XIV THE CIRCULATION OF CARBON DIOXIDE IN NATURE (continued) 3. The Yeast Fungi and Alcoholic Fermentation. Theory of Fermentation and Anaerobiosis. Concluding Remarks on the Circulation of Nitrogen and Carbon in Nature. ‘ . 126 Theory of Fermentation and Putrefaction : ; . 133 CHAPTER XV BACTERIA IN RELATION TO DISEASE 1. Diseases of Plants; Harmless ‘ Messmates’ in the Human Body; Pathogenic Bacteria ; Points of Attack and Sources of Infection ‘ 5 é . . . ‘ : » 137 CHAPTER XVI BACTERIA IN RELATION TO DISEASE (continued) 2. Description of some Pathogenic Species. . . . : : . : F « 147 CHAPTER XVII BACTERIA IN RELATION TO DISEASE (continued) 3. Mode of Action of Bacteria, and the Reaction of the Organism, Serum Therapeutics and Immunity. ‘ . ; ' : : , . : : 5 » 158 NOTES. : i 1% BR af wa ek > 6h a . . 169 INDEX ee Re rr) ee 185 *,* The Arabic figures inserted in round brackets in the text refer to the Bibliographical Notes, pp. 169-184. CHAPTER I INTRODUCTION: MORPHOLOGY Form, Size, and Structure of the Bacterial Cell, Cell-membrane, and Cell-contents. THE first historically recorded discovery of bacteria was made more than two hundred years ago by Anton van Leeuwenhoek, the Dutch naturalist and pioneer in the world of the infinitely little. Exploring those then untravelled regions with home-made lenses of wonderful efficacy, he found in the saliva of the human mouth minute organisms to which he gave the name of animalcula on account of their power of movement, In the description (1) and in the figures he gives (reproduced in facsimile in Fig. 1), curved and straight forms and long and short rods are plainly recognizable. They constitute the earliest reliable record of bacteria, the study of which in later times has revolutionized medicine and expanded into a new science. From the year 1683 Leeuwenhoek’s observations stood alone until, a century later, the Danish savant Miiller made further investigations on bac- teria. He classified them with the infusoria and gave them names that are now familiar to us all, Vibrio, Spirillum, and Bacillus. SP Aas ) =—— of ES — =~ Fic. 1. Oldest known figures of genuine bacteria (bacteria of the mouth) from Leeu- wenhoek. 4 and F represent Bacillus buc- calis maximus. B is perhaps Vibrio buccalis; its movements were followed by Leeuwenhoek from Cto D. Zis a species of coccus, and G, no doubt, a Spzril/um sputi- genum (compare with FIG. 26). In 1838 Ehrenberg described in his great work on infusoria a large number of bacterial forms, ranking them with his group Vibrionia, and from this time forward the bacteria have never again drifted entirely out of sight. It was not, however, until about the seventh decade of this century that FISCHER B av 2 INTRODUCTION: MORPHOLOGY the subject was taken up by pathologists, who from that time to this have contributed more than any others to the building up of the science of bacteriology. It was after the publication of Robert Koch’s (2) first studies on anthrax that the activity of those numerous investigators began, whose incessant industry has so furthered our knowledge of these most minute organisms and has accumulated a bulk of material such as the most voluminous treatises (8) are inadequate to grapple with. Before this period of expansion and rapid growth, a growth that has been in some directions too luxuriant for strength or permanence, the bacteria had been studied chiefly by botanists (Cohn, Nageli). Their work had been both physiological and structural, and it is on the foundations which they laid that the science in its modern form has been built up. For the fundamental labours of these earlier years, that saw, too, Pasteur’s brilliant researches into the physiology of fermentation, the student may be referred to Loffler’s lectures on the history of bacteriology (4). Morphology of the Bacterial Cell. The vegetative phase of all the smaller bacteria consists of a single cell. In the simplest types this has the shape of a sphere (coccus). If one diameter is greater than the other, i.e. if the sphere becomes a cylinder, it is spoken of as a rod or bacillus. In one group of cylindrical bacteria the cells are more or less spirally twisted (Vibrio, Spirillum, Spirochaete). In Vibrio (Fig. 2, ¢c) the twisting comprises only a quarter of a revolution or less, in Spirillum (Fig. 2, a) one or more widely separated turns, while Spzrochaete (Fig. 2, ¢) exhibits numerous closely-wound spirals like those of a corkscrew. The simplest method of permanently fixing the shapes of the bacteria is to let a small drop of water containing them dry upon a cover-glass. By this means they are all flattened to the plane of the glass, the vibrio, for instance, appearing, in spite of its three-dimensional curvature, only as a slightly curved ‘comma’-shaped rod (Fig. 2, @). It was for this reason that Koch called the vibrio of Asiatic cholera the comma-bacillus, but as a matter of fact it has, apart from the curvature, no resemblance to a comma. A spirillum dries in the form of a semicircle (Fig. 2, 4) and a spirochaete appears as a sinuous line (Figs. 2,¢; 26, f), The spirochaetes often attain great length, but it is uncertain whether they then consist of a single cell or of a connected chain of several cells. The other types of bacteria—cocci, bacilli, vibrios, and spirilla—are always unicellular. They may be grouped together as Hfaplobacteria as contrasted with the many-celled true filamentous forms, the Trichobacteria. In the members of this group (in the sulphur-bac- terium Beggiatoa (Fig. 17, a), for instance) the vegetative phase is an un- branched chain or filament of closely united cells, each one having the shape of a bacillus and becoming free from the others and motile at the period of MORPHOLOGY OF THE BACTERIAL CELL 3 reproduction. The wxbranched filamentous bacteria without definite sheaths are generally classed together under the collective name of Leptothrix. The most complex form is C/adothrix, an aquatic genus with numerous dicho- tomous branchings. Here the cell-chains are enclosed in a separate sheath and the lateral shoots arise by single cells pushing sideways through this envelope and growing out in a new direction. The resulting branch is thus only superficially connected with the parent stem (Figs. 2, f; 12). This is spoken of as ‘false branching’ as contrasted with true branching, such as occurs in the mycelium of a fungus (Fig. 2,¢). In this case one of the cells of the main stem sends out a lateral evagination which, continuing to grow in the new direction, forms a branch. This new member is a /ateral out- growth of the parent cell itself, and as intimately connected with the cells of the stem as they are with one another. Among the tricho- bacteria this method of growth is unknown. We have now enumerated the various morphological types occur- ring among the bacteria, and there remain to be considered the aggre- gates and colonies which arise among the haplobacteria by the Fic.2. a, Spirillum undutla, living, with spiral twisting ; , the same dried on the cover glass in semicircular shapes. ¢, Vibrio cholerae, slightly spiral ; d, driedincommaform, ¢, Spirochaele Ober maieri from the blood in recurrent fever. | Cladothrix dichotoma, a branched example, with sheath and so-called ‘false branching’; above “a short branch of two cells is just pushing through the sheath. g, Penicillium multiplication of the single cell or the proliferation of large numbers in close proximity. The Anthrax bacteria, for instance, often form glaucum, a fragment of mycelium with true branching (from Brefeld). Amplification: a@ and } 1500, ¢ and @ 2250, € about 800, 7 600, # 120. unbranched threads or chains which are externally undistinguishable from those of the true trichobacteria (Fig. 28). Unlike these, however, the anthrax filament may at any time break up into its constituent cells irrespectively of the advent of the repro- ductive process. Short threads of two or three cells, as well as single cells, may also occur. These phenomena, both in bacilli and cocci, will be con- sidered in more detail when the question of species is under discussion, Very frequently the bacterial cells are found collected in masses of more or less regular contour held together by a gelatinous substance. To these masses the name of Zoogloea has been given. They occur both in liquids and on the surface of solid nutritive substances, such as potatoes or gelatine. Sometimes in liquids they form a skin or pellicle composed of very dense BQ 4 INTRODUCTION: MORPHOLOGY aggregates of individuals. In many cases the zooglocae and pellicles are merely social aggregates of individuals*, just as a forest or a meadow is, and, like these, cannot be considered as morphological units. In others, such as the cloud-like mass shown in Fig. 3, or the delicate ramifying growth of B. proteus (Fig. 22), we have a true ‘colony’ before us, whose shape is not accidental, but a result of definite modes of growth and multiplication which recurs regularly in every culture, the characters thus produced being often of taxonomic value. In all such zoogloeae and pellicles each single bacterium is independent of the others. The plant remains a single cell, and there is never any division of labour such as occurs in the more complex colonies of the lower plants (volvocineae) or animals (coelenterata). The bacteria are the smallest of all known organisms, the most bulky coccus having a diameter of only about 24 (zg95 mm.). Among the Staphylococci (the most widely distributed pus-bacteria) the diameter is often not morethan 0-8 u,and the volume accordingly only j75500e000 Cub. mm. Inasmuch as the cell-substance contains a large proportion of water, the weight, too, is inconceivably small; thirty billion would weigh only a gram. In Fic. 3. Fragment of the botryoidal ag drop of water I c. mm. in size, seventeen zoogloea of an aquatic bacterium (Zoo- &lcca ramigera) of older authors. The fumndred million pus-cocci would have room Tods are thickly aggregated at the peri- hery, less so in the middle; they are and to spare. Even the comparatively large eld together by mucus. Magn. 56. : F compart ne Zoogioeae in Figs.17,4and anthrax bacillus is only 3-10 long and 1-1-2m broad, so that its volume would have to be increased eight million times before it attained the bulk of a middling- sized cigarette. Finer Structure of the Bacterial Cell (5). It would seem at first sight a hopeless task to attempt to gain an insight into the architecture of so minute a thing as a bacterium. Nevertheless the problem has been attacked, and, thanks to the efficacy of modern micro- scopes, some new facts have been established. We might well suppose that these organisms, standing as they do upon the very threshold of life, would be of simpler structure than those elementary units, the cells, of which all the higher plants and animals are built up. The first question then to be answered is whether all those parts which constitute a simple cell, such as a plant-cell, * The word ‘ growth-form’ is often applied to these aggregates. This literal translation of the German Wuchsform is an unfortunate one, inasmuch as the words growth and Wuchs do not connote precisely the same ideas, and, furthermore, the expression is used by different authors in slightly different senses (cf..Goebel, Outlines of Special Morphology of Plants, p. 480). PLASMOLYSIS 5 can be distinguished in the bacteria. The parts are: the cell-wall (w, Fig. 4, a), the protoplasm (f, Fig. 4, a), the nucleus (4, Fig. 4, a), and the cell-sap (s, Fig. 4,@). The cell-sap is contained either in spaces (vacuoles) scattered through the protoplasm, or in a large central cavity that fills out the greater part of the cell, the protoplasm being reduced to a thin layer coating the cell-wall (primordial utricle). Now the relation of this protoplasmic lining of the cell to the cell-wall is of great importance in the study of the structure of bacterial cells, and it will be necessary to discuss in some detail the conditions present in the case of plant-cells in general. It will then be seen how far the observable facts are competent to elucidate the finer structure of bacteria. The cell-sap of vegetable cells consists of water in which are dissolved various substances, organic compounds and mineral salts. The protoplasm, which forms a sac enclosing the cell-sap, is during life endowed with properties similar to those of animal membranes, being readily permeable to pure water, but almost or quite imper- ‘°°: } meable to the substances held in solution by the cell-sap. Asa result, these bodies exert a strong pressure (osmotic pressure) from within outwards upon the proto- plasmic sac, stretching it and pressing it tightly against the comparatively un- yielding cell-wall. An explanation of this is afforded by the modern Theory of Solutions which shows that the mole- cules of a substance dissolved in water act as though they were in a gaseous Fic. 4. Plasmolysis of a cell from a fine hair of Echallium elatertum. a, distribution of the cell-contents in natural state (mounted in water) > w, cell-wall; #, protoplasm (primordial utricle); s, cell-sap in central vacuole; 4, nucleus. 4, in 25% common salt solution, medium degree of plasmo- lysis; the protoplasm has rerteated from the cell- wall and is Being constricted into two parts. c, same cell after lying about half an hour in the 25 % NaCl; the contents form two separate spherical masses. Magn. 300. state and strive to fly outwards away from each other. Consequently, if the membrane is in the form of a closed sac surrounded by pure water and containing a solution, the substance dissolved behaves as a gas, and its molecules, like those of hot air in a bladder, expand and dilate the sac until the pressure inside is equal to that without. In the case of the protoplasmic sac of plant-cells this condition of equilibrium is unattainable, because unlimited dilatation is prevented by the cell-wall, and the result is that the whole of the cell is during life in a permanent condition of strain (¢rgor). It will be observed that osmotic pressure can only originate when there is water on both sides of the membrane, and this condition is present not only in water- plants, but also in terrestrial vegetation, inasmuch as the cell-walls are always saturated with water. If we now reverse the conditions and, instead of placing the cell in pure water, lay it in a solution of greater osmotic pressure than that of the cell-sap (5 per cent. saltpetre or 2:5 per cent. common salt) 6 INTRODUCTION: MORPHOLOGY it is easy to foresee what will happen. The pressure on the outside of the protoplasmic sac being now greater than that within, the protoplasm is pressed inward away from the cell-wall. The sac shrinks until the concentra- tion of the cell-sap is such that the osmotic pressure it exerts is just equal to that of the fluid outside. Since the shrinking of the protoplasm commences directly the pressure of the surrounding medium exceeds that of the cell- sap, we have in this phenomenon, which is known as Plasmolysis, a means ‘of measuring the pressure within the cell. The gist of the whole matter lies in the fact that the protoplasm is easily permeable to water both within and without, but presents a more or less impassable barrier to the molecules of the osmotic substances. As a result, the cells may lie for a long time in the plasmolysing solution without returning to their original state. If they be removed from the solution and placed in pure water again, the pressure of the molecules inside the protoplasm immediately reasserts itself, and the sac dilates until the original condition of turgescence is restored. All these phenomena are only observable in the living cell. At death the protoplasm loses its impermeability, and presents no hindrance to the molecules of substances in solution. In spherical cells the protoplasm is contracted by plasmolysis to a ball, but in long cylindrical cells, such as hairs for instance (Fig. 4), or algal cells, the elongated sac generally becomes constricted into two or three portions. These are at first connected by strands of protoplasm (Fig. 4, 4),’but finally separate and form distinct masses. The commonest case is where two round or oval lumps of protoplasm are left, one at each end of the cell (Fig. 4,c). When, by transference to pure water, the process is arrested and reversed, these masses melt together again as soon as they touch and continuity is restored. This de-plasmolysation must not be too rapidly performed, or the fragments of the protoplasmic sac may burst, in which case the protoplasm invariably dies. The application of plasmolysis to the study of bacterial cell-structure may now be discussed, but it will be advisable first to consider the results which other methods of investigation have yielded, notably those of fixing and staining. If we examine bacteria under a very high power objective (2,000 diams. and over) very little can be seen. The cell has a fairly sharp outline, but it is not possible to distinguish a separate membrane enclosing the cell-contents. The latter appears as a pale homogeneous mass with occasional granules of stronger refringency, and in the case of some of the larger bacteria (Spircllum, Cladothrix) sap-vacuoles differentiate themselves from the protoplasm by their watery appearance. These meagre détails are all that can be seen in the fresh unprepared state,—of the organs of locomotion nothing can be seen,—but by the customary methods of fixing and staining a number of other particulars can be made visible. If a minute. speck of a pure culture be mixed with a fixing fluid (e.g. osmic or chromic acid), spread upon a cover-glass, and allowed to dry, the bacteria adhere FINER STRUCTURE OF THE BACTERIAL CELL 7 strongly to the glass and may by washing be freed from the fixative and stained with haematoxylin or an anilin dye. Under this treatment all bacteria, save the most minute forms, show the same structure (Fig. 5). The membrane appears as a sharp outline enclosing a protoplasmic mass which is smooth and homogeneous where it lines the membrane, but full of irregular spaces (vacuoles) towards the centre. The protoplasm is uniformly stained and shows no trace of finer details. Only the strongly refracting granules already referred to take on a deeper tinge. Being similar in this respect to the ‘chromatic substance’ of cell-nuclei, they are sometimes spoken of as ‘chromatin’ granules: a doubtful analogy at best. When the bacterial cell contains only one such granule (Fig. 5, a, c, d, e) it certainly makes the impression of a nucleus both as regards its size and its position in the cell. But there are, just as often as not, several granules in a single cell (Fig. 5, 4, d, 7), and apart from the colour-reaction we have no adequate reason for regarding them as nuclei. They bear no relation to the process of cell- division, and it is better to regard them merely as granules of reserve food-stuff. All efforts to detect a true nucleus have as yet failed, and it is safer at present to look upon the bacterial cell as being devoid of one. There is however another view of the matter that has gained many _ Fic. 5. Bacteria fixed with alcoholic iodine solution and stained in various adherents. When bacteria are stained with anilin colours they appear to take up more of the stain than does the protoplasm of ordinary plant-cells, and to retain it with greater tenacity in the face of decolourizing reagents such as alcohol and weak acids. Since moreover the ways. a and 4, Cladothrix dichotoma with sheath and one (a) or several {?) chromatin granules in each cell haematoxylin). c, Typhoid bacteria (methylene blue). d@, Vibrio cholerae (methyleneblue). 7, Spirillum undula (haematoxylin), All the figures show the cell-structure described in the text. Chromatin granules, black; vacuoles (sap-vacuoles), white ; protoplasm, stip- pled. Magn. a-e 2250, f 1500. nuclei of all cells are distinguished by their avidity for colouring matters there has arisen the idea of a certain group of substances, xzclear stains, that possess a peculiar affinity to nuclear substance. This affinity is mythical. Nuclei take up a// stains with more avidity than the protoplasm does,.and this behaviour rests probably not on the chemical nature of the nucleus but on its physical constitution, such as its great density and power of absorption. It is to the failure to recognize these facts that the statement must be attributed which we meet with in almost all books on bacteriology, namely, that the bacteria have a particular affinity to ‘ nuclear stains’ and that we are therefore justified in regarding them as primitive nuclei devoid or almost devoid of protoplasm. Speculation followed speculation, and, the bacteria being the simplest organisms known to us, the hypothesis has been put forward that the first living things to arise on the earth were similar naked nuclei, and that the protoplasm is the product of subsequent 8 INTRODUCTION : MORPHOLOGY evolution. The tingibility of the cell-contents in bacteria is not so great when one takes into consideration the amount of stain taken up by the cell- membrane, and even though in some cases an unusual amount may be absorbed there is certainly nothing that warrants us in assuming the existence of a specific reaction between the anilin stains and nuclei. The bacterial cell then, interpreted in the light of the above facts, is a simple protoplast enclosed within a cell-membrane but devoid of a nucleus. The phenomena of plasmolysis lend additional strength to this view. To plasmolyse bacteria it is only necessary to place upon a slide a drop of water containing bacteria, lay upon it a cover-glass (with a few fibres of cotton-wool between to prevent crushing), and allow the plasmolysing fluid to run in at the edge. Spherical and very short rod-shaped bacteria become under this treatment more highly refractive. This increase of density is the outward expression of the contracting of the cell-contents, and in these very minute forms it is the only change perceptible. In the larger bacteria, however, such as typhoid, cholera, spirillum, cladothrix, &c., the details of the process ‘Fic. 6. Plasmolysis of bac- teria. a, Vibrio cholerae from an agar culture (Bouillon+1 7% peptone+1 (- rape sugar) in 1-25 NaCl. They are plasmo- lysed but still living ; the proto- plasm is broken up into refrin- gentgranules, 6, Thesame more highly magnified, ¢, Vibrio cho- Zevae plasmolysed with cilium. @, Typhoid bacilli in 25 % NaCl, stained ; cell-contents in various positions, to the right a cell with the protoplasm arranged as in the plant cell (Fig. 4, 4). e,Spiril- lum undula plasmolysed by the evaporation of stagnant water ; the structure of the clumps of are readily followed. Solutions of 2-5 per cent. saltpetre or 1 per cent. common salt (fresh blood serum contains 0-7 per cent. NaCl) are sufficient to set up plasmolysis. As soon as the solution reaches the bacteria its effect is visible, and one sees the protoplasm gradually raised away from the cell-wall and pushed inward. Just as in elongated plant-cells, it frequently breaks up into two or three highly refractive rounded masses which expand and fuse together again if the plasmolysing solution be peed gerne ape oe replaced by pure water (Figs. 4 and 6). In short Magn. a 300, b-e 1500. rods the protoplasm generally contracts to a single spherical or egg-shaped mass which lies sometimes in the centre of the cell, sometimes at one end. With a low amplifica- tion plasmolysed bacteria often look as though they had broken up into a row of granules (Fig. 6, a), but careful examination under a high power reveals the delicate membrane of the cell-wall still intact (Fig. 6, 4). Two facts of fundamental importance ate brought to light by these pheno- mena. They show in the first place that the protoplasm of the bacterial cell is not, as is the case with the ‘pellicula’ of infusoria, attached to the cell-wall, but lies free within it just as does the protoplasm of plant-cells, and furthermore that the osmotic pressure in the bacterial cell is com- paratively low, only about half that of the cells of higher plants which need solutions-twice as strong to plasmolyse them. The pressure inside the bac- FINER STRUCTURE OF THE BACTERIAL CELL 9 terial cell is nevertheless considerable, namely from two to three atmospheres, In stronger solutions (5 per cent. saltpetre) the plasmolysis is rapid but ceases in a few minutes, and the protoplasm expands and fills out the cell again. ‘This retrogression of the process is caused by the penetration of the molecules of the salt. Even in weak solutions (2-5 per cent. saltpetre) this takes place in a few hours, showing that the protoplasm of bacteria is far more easily permeable than that of the higher plants, a peculiarity which is shared by other low organisms such as flagellata, cyanophyceae, and florideae. A most important result of this greater permeability is the ¢ase with which bacteria are able to adapt themselves to changes of concentration in the medium they live in, and it must greatly facilitate the absorption of food- stuffs as well as the excretion of the products of metabolism such as toxins and enzyms. Finally, it must be mentioned that the motile forms retain their power of movement during plasmolysis, from which fact certain conclusions can be drawn as to the nature of the organs of locomotion. In the usual methods of preparation the liquids in which bacteria are suspended contain a considerable amount of soluble salts (the ordinary nutri- tive media hold o-7 per cent. NaCl), and when a drop evaporates upon the cover-glass the liquid becomes more and more concentrated, so that before the bacteria become dry they are plasmolysed. It is such plasmolysed cells which we see in most cover-glass preparations, many species such as 2. typhi, Vibrio cholerae, and Spirillum undula frequently showing strongly stained granules (Polar-granules) at each end of the cell, the central space being empty (Fig. 6). The meaning of these appearances is evident. The general conclusion to which all these observations lead us is that the bacterial cell-contents are a mass of protoplasm representing an osmotic system precisely like that of the cells of the higher plants, but, unlike them, having no nucleus. The membrane or cell-wall of the bacteria is in most cases thin, delicate, colourless, and without a perceptible finer structure. Unlike the cell-wall of plants, it consists of a protein substance (no doubt a modification of the protoplasm) and not of cellulose *. It would seem therefore that the degree of division of labour which characterizes the higher plants, where there is an outer very permeable membrane of cellulose, and an inner more or less impermeable protoplasmic layer, has not been reached by the bacteria where communication between the organism and the outer world is regulated by two layers of medium permeability. As is the case in many algae and cyanophyceae, the cell-wall of some bacteria secretes a jelly-like substance which appears optically as a delicate * Analysis of the cell-wall of the B. ‘udercudosis shows that it contains a large amount of true cellulose, so large indeed that it has been detected in tuberculous animal tissues, and was thought to be a product of metabolism (Freund). 10 INTRODUCTION : MORPHOLOGY clear space, sometimes narrower, sometimes broader than the cell it sur- rounds (Fig. 7, c and d@). It may be rendered more visible by special methods of staining. It owes its origin to the swelling up of the outer layers of the cell-wall by absorption of water, the inner layers being con- stantly built up anew from within. This gelatinized membrane may become more and more liquefied until large numbers of cells are buried up in a common jelly-like mass, and it is in this way that the various forms of zoogloea arise. The majority of bacteria have no such envelope at all, or at most a thin invisible mucilaginous coat. The formation is often largely dependent upon the nature of the food-stuffs available (Fig. 7, 6 and c). Inasmuch as ‘many bacteria secrete large quantities of mucilage without forming a definite envelope, the word ‘capsule’ should be sparingly used and restricted to clearly marked sheaths around the cell. Only in such cases has it any classificatory value (Lezconostoc). Moreover, the clear spaces visible around bacteria in dried preparations are frequently artificial products. These are par- ticularly prone to arise in fluids like blood and lymph, which con- tain albuminous substances, the albumen being seemingly precipi- tated upon the bacteria, around which it forms a coating that easily takes up stain. When dry- ing takes place the cells, being the Fic. 7. Capsules and mucous sheaths. a, Bac. an- thraciswith so-called capsules in a dried streak-preparation from the liver of a mouse; for the nature of these and of the capsules of other pathogenic bacteria, see p. 10. dd, L - : ‘cides (frog spawn fungus); 4, on non-saccharine media, without sheath; ¢, with mucous sheath on medium containing sugar (d-c from Liesenberg and Zopf); @, older zoogloea mass with chains of cells (from van Tieghem). Magn. a 1500, 4 and ¢ 1200, d 500. last to give up their moisture, shrink away from this envelope and each one appears to be sur- rounded by a capsule (Fig. 7, a). That this is, however, nothing but an artificial structure is shown by the fact that the same bacteria which in the blood of an animal exhibit a capsule are, with some doubtful exceptions, both in the tissues and in cultures, quite devoid of one. In a mouse which has died of anthrax, the bacteria in the blood seem to have a capsule (Fig. 7, 2), whilst those in sections of the kidney are totally devoid of one. That this is not due to a difference of the modes of growth in the blood and in the tissues is shown by the fact that the naked anthrax bacilli from an agar culture become provided with an apparent ‘capsule’ if they are rubbed up with a drop of blood from a healthy mouse and allowed to dry upon a cover-glass. Among the trichobacteria (Cladothrix, Crenothrix) and some of the cyanophyceae (Tolypothrix, Lyngbya), the outer layers of the cell-wall undergo a hardening process which leads to the production of a firm sheath FINER STRUCTURE OF THE BACTERIAL CELL II enclosing the cylindrical cells in such a way that they are freely movable within (Figs. 2 and 5). At the period of reproduction the cells, them- selves devoid of sheaths, become furnished with cilia, and, escaping from the open end of the sheath, swim away and give rise to fresh colonies. In this way whole forests of cladothrix are emptied of their cells and there remain only the stiff sheaths which finally swell up and become disintegrated. Occasionally the sheaths become fossilized as it were, by the deposition upon them of oxide of iron. They are then very resistant to decay, and accumulate sometimes in enormous quantities in chalybeate springs and ferruginous marsh water (see Chap. VII). The term ‘sheath’ can only be applied when a distinct tube is formed in which the chain of cells are enclosed; colourless spaces in stained preparations of filamentous bacteria do not necessarily imply the existence of a sheath, being often the result of plasmolysis. CHAPTER II MORPHOLOGY—continucd . Pigments, Intracellular Products; Movement and Organs of Locomo- tion; Cell-division; Spore-formation and Germination. Most bacteria are individually colourless, and appear, even when massed together in a pure culture, either white or of a yellowish tinge. There are, however, a considerable number of species, the chromogenic or pigment-bacteria, remarkable for the brilliant colouration of their cultures. ‘Some of the Sarcinae, for instance, have a bright yellow tint, Staphylococcus pyogenus aureus is golden yellow or orange, B. brunneus yellowish brown, Micrococcus agilis, Bacillus prodigiosus,and Spirillum rubrum each a different shade of red, B. cyanogenus (the bacillus of blue milk) blue, B. violaceus a deep violet ; and many kinds of water-bacteria, as well as the bacillus of blue pus, give origin to brightly fluorescent pigments. The production of all these colouring matters is very variable and largely dependent upon the conditions of growth, upon the composition and reaction of the culture media, and upon the influence of oxygen, light, and heat. Most pigment-bacteria appear under the microscope to be colourless, and the question at once suggests itself whether the colouring matter is really contained within the cell. In B. prodigiosus, the cause of the ‘bleeding host,’ the pigment can be seen in the form of granules scattered about between the colourless bacteria, so that in this case there can be no doubt as to the seat of the colour of the cultures. The various fluorescent substances also are secretions of the bacteria with which they are associated, and they diffuse into the culture medium, which often fluoresces brightly throughout its whole thickness. The pigment of B. cyanogenus also is dissolved in the culture medium. In most pigment-bacteria similar con- ditions prevail, that is to say, they are ‘chromoparous’ (6). Some species, on the other hand, are actually ‘chromophorous, i.e. the protoplasm itself is coloured. This is the case with the sulphur bacteria Chromatium and Thiocystis, and with some sap-green species (B. virens). As regards these last, however, it is undecided whether they are bacteria or minute algae (7). BACTERIAL PIGMENTS AND CELL-CONTENTS 13 Finally, there are bacteria, B. violaceus for example, in which the pigment is lodged mainly in the cell-wall; such forms may be termed ‘parachromato- phorous, There is conclusive evidence that the red colouring matter of the sulphur bacteria, ‘ bacteriopurpurin, performs the same functions as the chlorophyll of higher plants, assimilating carbonic dioxide under the in- fluence of light and giving off free oxygen (see Chap. VII). Only the outer layer of the cell contents is charged with pigment, the central mass being colourless. In all probability the colouring matter is of importance physiologically only where it is bound up with the protoplasm. In all the ‘ chromoparous’ bacteria the pigment is an excretion merely, and, as might have been expected, chemical and spectroscopic analysis fail to show that it has any connexion with assimilation. Some of the bacterial pigments are of the nature of lipochromes and are related to the fats; others have a basic character and resemble the ptomaines. Many seem to belong to the proteins, and the colouring matter of B. cyaneo-fuscus has a composition similar to that of indigo. Differentiated cell-contents, such as the starch or aleurone grains of higher plants, are wanting in most bacteria. The protoplasm stains a uniform golden yellow when treated with iodine. Some of the butyric acid bacteria, however, as well as various species inhabiting the human mouth, form an exception to this rule, and take on a blue or deep violet tint. Very little is known about the substance to which this reaction (granulose reaction) is due; it has been called granulose merely on the strength of its behaviour towards iodine. Whether its chemical composition is similar to that of the granulose of starch cannot be decided by this reaction alone. It seems to be a carbohydrate, however, and carbohydrates as food are necessary for its growth. The mouth bacteria obtain these of course from our food, and the butyric acid organisms from the fermenting substances in which they grow. The‘ granulose’ makes its appearance in the bacterial cell in the form of very minute grains, so that after treatment with iodine the yellow protoplasm seems full of black points. These granules become considerably larger, and then seem to diffuse through the cell contents, so that finally the whole cell stains blue or violet. In the butyric acid bacteria granulose is at first absent, but is formed when the time of sporulation draws near. In that part of the bacterium, however, where the spore appears, none is deposited, the protoplasm staining from first to last yellow with iodine. It would seem that we have here an instance of division of labour, the swollen end of the bacterial cell being devoted to sporulation, and the cylindrical portion serving as a manufactory and storehouse for granulose, from which the spore may be nourished (Fig. 11, c—/). 14 MORPHOLOGY Absolutely unique in the whole of organic creation is the case of those bacteria whose protoplasm contains free sulphur (Chap. VII). In these ‘sulphur-bacteria’ the cell is often crammed full of highly refracting globules, which are soluble in alcohol, xylol, bisulphide of carbon, and alkalies, and give other reactions of pure sulphur. It is in a non-crystalline, soft, amorphous state, and when dissolved out by carbon disulphide leaves delicate clear vacuoles in the protoplasm. Deposits of other substances within the bacterial cell have not as yet been observed, with the exception of fat or oil, which sometimes appear in the form of minute globules, particularly in old cultures. Movements and Organs of Locomotion. All bacteria, whether spontaneously mobile or not, are, when suspended in water, in constant motion. Examined under a high power, they are seen to be shaken by a rapid oscillatory movement. This, the so-called Brownian movement (8), is in no sense a vital phenomenon, but is common to all finely- divided solid particles suspended in liquids. It may be observed in the particles of gamboge or indian ink rubbed up with a little water. Its cause is not well understood. As a general rule there is no danger of mistaking the trembling motion for the spontaneous movements of bacteria. There are two kinds of independent motion distinguishable among bac- teria—the ordinary swimming movement, and the rarer ‘ oscillation’ peculiar to some trichobacteria and similar to the movements of some cyanophyceae. Among the cocci, Micrococcus agilis is the only one endowed with the loco- motory powers, but of the bacilli a large number are actively mobile, such as B. typhi, the butyric bacteria, and the majority of the putrefactive organisms. The vibriones and spirilla, too, are good swimmers. The bacilli of tuber- culosis, diphtheria, anthrax, many of the pigment bacteria, and the acetic and lactic ferments are permanently immobile. When bacteria in active movement are examined under a high power they seem to shoot across the field of view with amazing speed; but this velocity is only apparent, being due to the magnification of the distances they cover. Reduced to actual figures, the absolute rate of progress is 10 cm. in 15 minutes, or about 3 mm. per second—in proportion to their size a very fair speed. Locomotion is effected by special organs, the cilia or flagella. In the fresh state, or in bacteria stained in the ordinary way with anilin colours, the cilia are not visible, and special methods of preparation are necessary to render them so. That worked out by Loeffler (9) has the claim to priority and is the best. He employs in the first place a mordant composed of an iron salt and tannin, which causes the stain to be thrown down not only within the cell, but also upon its surface and upon the surface of the cilia, which LOCOMOTION AND LOCOMOTORY ORGANS 15 then appear deeply coloured. Both bacteria and their cilia are by this process made to look thicker than they really are, and appear therefore more clearly. According to the arrangement of the cilia upon the cell the bacteria may be divided into three groups—monotricha, lophotricha, and peritricha (0). The members of the first division bear a single flagellum at one end of the cell (Figs. 8, 2, and 23); examples are the cholera germ and other vibrios, and B. pyocyaneus. The lophotrichous bacteria have in place of the single flagellum a brush or tuft of cilia (Spirdllum, many putrefactive bacteria; Figs. 8,4; 22, a; 12) and the peritrichous forms have their whole surface beset with cilia more or less thickly arranged, so that they appear almost as though they had a shaggy coat (B. typhi, B. coli communis, some butyric ferments, B. subtilis, B. pro- zeus, and many others; Figs. 8, c, e, and II, 13, 22, 24, 28). The arrangement of the cilia is constant in each species, and even the number of cilia united to form the terminal tuft has a taxo- nomic value. ; Functionally and structurally the cilia of bacteria correspond to the analogous organs in other groups, such as the swarm-spores of algae and fungi, the infusoria, and the ciliated . Fic. 8. Types of ciliation. @, monotrichous cells of metazoa. They consist of long (1#6rio cholerae) ; 6, lophotrichous(Spirillum un- < ‘i dula), c, peritrichous (typhoid bacilli); @, develop- delicate threads of protoplasmatic sub- ment during fission of the cilia tuft of Spiril/uim ‘ a undula; eé, partial and (to the right) complete stance, which vibrate to and fro and __ looping’of the cilia in Bac. swétilis. Magn. a-e % 2250. In Figs. a, 4, c, the structure of the cell-con- propel the bacterium through the water tents has been taken from iodine preparations : (Fig. 5) in order to illustrate the structure of bac- asa boat 1S propelled by oars, They teria as far as is known at the present time. In Figs. dand e the contents are schematically shaded, ro re) ] ] from the d for in these preparations (stained b effler’s aed Uk 0! y bo 4 of method) the eecinitatian of colour on the cell- the cell (Fig. 8, @), and are not re-__ surface conceals the structure. See also Figs. 11, 12, 13, 17, 22, 23, 24, 26 and 28, which give further tractile. The shrinkage of the cell- examples of various ciliation. contents during plasmolysis leaves the cilia unaffected, so that they would seem to be fairly independent organs. They receive their nourishment and vs viva from the protoplasm, with which they are connected through minute pores in the cell-wall. The cilia are very sensitive to injury, unfavourable conditions causing them to be thrown off. When shed in this way they sometimes become disintegrated and disappear in a few minutes. As a result a preparation made from a culture containing actively mobile bacteria frequently shows not a single cilium, and this is particularly the case when old cultures are employed, the bacteria they contain being especially sensitive. Not infre- quently the cilia become rolled up or looped before they are shed, and 16 MORPHOLOGY peritrichous bacteria then appear to be surrounded by a mass of bubbles (Fig. 8, ¢). The speed of movement of the bacteria is subject to great variations, the cilia being often paralyzed by noxious physiological conditions. Lack of oxygen, insufficient nutriment, and the accumulation of acid in old cultures are all factors which bring about this paralysis, and it is only necessary to remove them (by neutralization of the acid, by removing the cover-glass, by the addition of sugar, asparagin, &c.) to at once restore movement to the cilia. That bacteria are motionless is not therefore a proof that they belong to a non-motile species, and in some cases much experience is necessary for decision. The linear progression of bacteria through a liquid is always accompanied by a rotation around the longer axis of the cell, as is the case with the swarm-spores of the lower thallophytes. In the flagellate infusoria the end of the cell bearing the flagellum is always in advance in swimming, and probably the lophotrichous and monotrichous bacteria move in the same way, a reversal of the path necessitating a revolution of 180° around the transverse axis of the cell. The peritrichous bacteria have a similar mode of progression to that of the members of the other groups, but in addition they often exhibit curious tumbling movements, the cell hurrying across the field of view and turning somersaults the whole way. In Beggiatoa, one of the filamentous bacteria, remarkable slow oscilla- tory movements of the threads are observed, isolated fragments of which are also able to glide to and fro as diatoms do. Both these types of movement occur too among the cyanophyceae, giving the name to one group of forms, the Oscillariae. The cause of the phenomena is quite incomprehensible, no organs of locomotion having been discovered, and the cell-wall being apparently closed all round, so that the protoplasm cannot be perceptibly extruded anywhere. It is, however, highly improbable that the motion is independent of the protoplasm. More delicate methods of research will perhaps enable us to clear up the mystery. The term /lexile has been applied to filaments which, although fer se rigid and stiff, are not straight, but twisted and thrown into curves. It is supposed that such flexile filaments have somewhat less rigid cell-walls, which yield to the strain exerted on them by the cell contents. These flexile threads occur in all trichobacteria, but in the haplobacteria the membrane is always rigid. Kinks and twists in filaments seem to arise frequently by the mechanical displacement of neighbouring cells, The subject of flexility needs further investigation. Reproduction of Bacteria by Fission (11). Given suitable conditions of nourishment, bacterial cells, like those of all other organisms, divide into two when they reach a certain size. In REPRODUCTION OF BACTERIA BY FISSION 17 the filaments of the trichobacteria cell-division means growth and increase of length of the filament, and the process can only be called multiplication when a cell detaches itself from its fellows and grows out into a new filament. Among the unicellular haplobacteria, however, each cell-division means duplication of the individual. ‘The procedure follows the same course as it does in the tissues of the higher plants. The cell first increases in length, and then becomes divided into two by a transverse wall. The spherical bacteria (cocci) assume an ellipsoidal figure before dividing, and the two new cells are at first flattened where they are in contact, rounding off to perfect spheres again as they separate. Of the finer details of the process nothing has been seen among the bacteria, nor anything resembling 1 those changes in the arrangement of the cell-contents which characterize cell-division in the higher organisms. The protoplasm is simply abstricted into two parts separated by the in- | growing cell-wall, as in Cladophora. | 4G : In the filaments of this alga cell- division is ushered in by the deposi- a. tion of a ring of cellulose on the Fic. 9. Transverse division of a multinuclear livin, inner surface of the cell-wall, where the new partition is to arise (Fig. 9, a), By constant addition to its inner edge this ring grows broader, until at last, cutting through the proto- plasm, it stretches right across the lumen of the cell and divides it into cell of an alga (Cladophora fracta). The new cell- * wall (as in all multinuclear cells) arises independently of the division of the nuclei. In Fig. @ the new trans- verse cell-membrane grows out as a ring at right angles to the sides of the cell and appears (in optical section) as rod-like en beige from the latter, the free ends being surrounded by granular protoplasm, The large round bodies are starch grains. Fig, 6 represents an older stage, the new membrane is com- lete with the exception of a small spot in the centre. The figure is meant to give an idea of what probably takes place during the fission of bacteria which are too minute to allow the process to be followed. From Strasburger. Magn. 600. two equal parts. There seems little doubt that division of the bacterial cell takes place in the same way, but the details of the process are too minute even for our best microscopes to follow. Under the most favourable conditions of temperature and nutrition cell- division takes place in a very short time. B. subtilis, the ‘ hay-bacillus,’ completes the process in half an hour. The cholera vibrio needs only twenty minutes, so that in one day a single *comma-bacillus’ would rejoice in a progeny of sixteen hundred trillions. This mass of bacteria would contain one hundred tons of solid residue, and it would thus be necessary to make experiments on a gigantic scale to allow even one single cell to multiply with perfect freedom. In nature, of course, this increase in geometrical progression can never take place: in the first place, because the necessary supply of food is never present, not even in the diseased body, and then again because many of the bacteria soon perish, and the accumulation FISCHER Cc 18 MORPHOLOGY of the excreta (bacterial products such as acids, &c.), particularly in pure cultures, arrests development. As standards of comparison it may be mentioned that a complete division of nucleus and cell in the staminal hairs in Tradescantia takes from eighty to one hundred minutes, and that the process may be effected in Asmoeba in from ten to twenty minutes. The rate of multiplication among the bacteria is therefore nothing extra- ordinary, particularly when we consider the simple structure of their cells and the absence of a complicated karyokinetic process. When a cylindrical bacterium divides into two it is immaterial, as far as the result is concerned, whether the division is longitudinal or transverse ; but, as a matter of fact, we find that it is always transverse, be the cylinder straight or spirally twisted. This is in harmony with the generally observed law in cell-division, that the new membrane is always formed in the most economical manner; that is to say, in such a way that a minimum of material is required. In cylindrical cells this is manifestly the transversal position. When the cells resulting from such division remain connected, chains and filaments arise, particularly in the case of non-motile species. They occur sometimes even among motile forms, such as the cholera vibrio (Fig. 28, 2), although in this case the moving cells are more easily separated. Inasmuch as transverse fission is the only mode of increase among cylindrical bacteria, it follows that chains or filaments are the only kinds of colony or ‘ growth-form’ that can occur, save where there is a subsequent shifting of single cells (as in Cladothrix). In the monotrichous and lophotrichous bacteria it is always the non- ciliated end of the dividing cell which bears the cilia for the new individual (Fig. 8, 2), the inner ends of the two rods never bearing them. In all cases where the cell seems to have cilia at both poles there are in reality two young cells still united by their inner ends. A curious possibility arises out of this fact. At every division it is only one individual that is provided with new cilia, the other cell bearing the old ones, and this process may be repeated time after time. As a result, it may happen that of two bacteria swimming about and not as yet disconnected one has brand-new cilia, and the other a set which has lived through hundreds of generations. In peritrichous forms it seems probable that, during the elongation of the cell preparatory to fission, new cilia arise between the old ones along the side of the cell. Among the spherical bacteria it is manifestly, as far as the economy of the cell is concerned, a matter of indifference in which direction the plane of fission lies, because every plane that passes through the centre of the cell represents a minimum. A predilection for one particular plane must there- fore be the outward expression of hereditary morphological characters that possess a classificatory value. The closest resemblance to the cylindrical bacteria is shown by those spherical forms in which the planes of fission of REPRODUCTION OF BACTERIA BY FISSION 19 successive generations are all parallel. In this case, if the cells remain attached to each other, unbranched chains arise as in Streptococcus pyogenes (Fig. 10, a), a pus bacterium, or as in Leuconostoc mesenteroides (Fig. 7, a). If fission takes place alternately in two directions at right angles to one another, flat tabular groups of cocci are produced, frequently quadrangular, with four, sixteen, sixty-four cells and so forth. The red sulphur-coccus ————Lhiopedia and Micrococcus (Pediococcus) tetragenus (Fig. 10) are examples of this mode _ of growth. Finally, the planes of division may be formed in _ three different directions successively, at right angles to each other, giving origin, when the cells remain adherent, to cubical packets. The genus Sarcina (Fig. 10, c) offers a typical instance of these. It is, of course, possible to determine the manner of fission among cocci only when the cells remain’ adherent to each other, or where successive generations are held together ‘by gelatinous exudations. If the cells separate after fission their grouping gives no indication of the manner of division. FIG. 10, Modes of fission among the coccaceae. a, Streptococcus pyogenes, planes of fission always parallel, resulting in chains; 5, Ped/ococcus tetragenus (Micrococcus tetragenus), fission alternately at right angles in two planes, resulting in plate- -like growths ; c, Savcéxa ludea, fission in three planes at right angles to each other, resulting in cubes or bale-shaped growths. There remains yet another mode of increase conceivable, in which the planes of division arise without definite sequence or relation to previous planes. This would result in all manner of irregular cell-groups, above all in rami- fications in one or more planes; but there are no observations that would prove the existence of such, and we can only conclude that irregular fission does not take place. It seems likely that even in the great host of micro- cocci (e.g. the Staphylococci of the pathologists) the splitting up of the cells follows a fixed rule, but that their prompt severance from one another prevents the formation of large groups. As far as the Staphylococci are concerned, division probably occurs in the three dimensions alternately, but not in regular sequence, so that after a few fissions in one plane a new direction is taken at right angles to it, to be changed again soon for a third. In this way we should get short chains, quadrate groups, and minute cubical clusters side by side, and this is what actually occurs (Fig. 28, a). Spores and Sporulation (12). The bacterial cell, although able for a short time to resist the injurious effect of an unfavourable environment (drought, changes of temperature) or an insufficient food supply, cannot defy such influences for an unlimited Ca 20 MORPHOLOGY period, for months or years. It has, however, the ability to enter into a resting stage, to assume a shape endowed with great powers of resistance— the ‘spore.’ This power it shares with all low organisms such as algae or fungi, which are periodically subject to dearth of nutriment or the inclemency of the seasons. The term ‘spore’ is commonly applied to all these resting forms, but must not be supposed to connote anything but a similarity of function. The word ‘endospore’ has in addition a special morphological significance, and is applied to the commonest form of bacterial spores. Taking the sporulation of the anthrax bacillus as a type, we find the process begins by a contraction of the cell-contents, which ball themselves together into an egg-shaped mass as yet devoid of a proper membrane, and lying loose in the otherwise empty rodlet: this is the young spore Fic. 11. Sporulation and germination. a@, Anthrax bacillus with the cell-contents contracted to form the youn spore, as yet without membrane; 4, ripe anthrax spore still enclosed in the rod, whose shape has not changed. cand d, Clostridium butyricum (Prazm.) : ¢, vegetative Benenchacs stage ; d, ripe spore in the swollen spindle-shaped cell, the contents of whichiare not quite used up in spore-formation. ¢ and f, Plectridium palud : e, unchanged rod; 7, drum-stick or Lt form with ripe spore in swollen end. Fi Germination of spore in B. anthracis; the young rod elongates itself in a direction parallel to the longer axis of the ellipsoidal spore (3, 4) (from Prazmowski). A, Germination of spore of 2. subiz/is; the new rod grows out at right angles to the axis of the spore (3-5), and, as in anthrax, separates from the spore brane (6) Seon Pr ki). 2B. leptosporus; the spore, surrounded by a thin mucous coat (dotted 1-3), grows out into a rod without shedding a membrane; simplest form of germina- tion (from Klein). Magn. a 2250, 5-/ about 1200, g-7 1000. (Fig. 11, a). This contracts still further, becoming denser and more highly refractive than when it filled out the cell, and there forms upon its surface a firm coat, the proper spore-membrane, to the impermeability of which the durability and resistance of the spore are due.. The spore lies now complete within the cell-wall (Fig. 11, 4), which gradually decays and sets it free. The free spore, which may be found abundantly in cultures two to three days old, is a highly refracting, ellipsoidal, immobile body, considerably smaller than the cell in which it arose. Under favourable conditions of temperature it germinates in twenty-four to thirty-six hours. Rags of the cell-membrane may often be seen still adhering to it (Fig. 11, g, 4, 2). The spores of B. subtilis are formed in a like manner, the rods, as in B. anthracis, retaining their cylindrical shape during the process (Figs. 11,4; 13,c). A less simple type of sporulation is that where the rods change their shape, becoming SPORES AND SPORULATION 21 spindle-shaped (Fig. 11, c, d), or swollen at one end like a drum-stick (Fig. 11, ¢, f). The greater part of the cell-contents is withdrawn into this inflated portion, and forms the spore, but some remains in the cylindrical section of the cell, where it can be rendered visible by plasmolysis as an extremely delicate layer lining the membrane. It is no doubt from this remnant of protoplasm that the cilia derive their nourishment at the time of sporulation ; for they are not drawn in during the process, but continue to lash vigorously to and fro until the spore is set free and nothing but the empty cell remains. The spindle-shaped butyric bacilli and the drum-stick cells of some bacteria in bog-water form their spores in this manner, and it seems that in all cases where the spore-bearing part of the cell alters its shape some of the protoplasm remains in the cylindrical section. It is certain, in spite of many contradictory statements, that the alteration in shape has the value of a specific character, and can be used for classificatory purposes. The significance of the process lies, of course, not in the change of shape, but in the differentiation of the cell-contents into two parts, one for the maintenance of life in the cell, the other subservient to reproduction. It is a foreshadowing of that division of labour which secures the distribution of spores and their transport to places suitable for germination. Endospores are still unknown in a large number of bacteria—in the whole group of cocci, for instance, and in many pathogenic forms, such as the bacteria of typhoid fever, tuberculosis, diphtheria, and cholera. That they do form spores there can be no doubt, but our artificial methods of culture do not offer them the necessary conditions, the determination of which is one of the important tasks that bacteriology has before it. In the patho- genic bacteria mentioned, as well as in many other forms, highly refracting granules have been described as spores, but proof is wanting ; they have not been seen to germinate. It is certain that in a number of cases what have been taken for spores are merely ‘chromatin-granules’ and plasmolysed lumps of protoplasm in disintegrated or decaying cells. Ordinary methods of staining leave the spores untinged, and they appear, so long as they remain within the body of the cell, as clear colourless spaces. It must be remarked, however, that we are not for this reason justified in regarding a// clear spaces in stained bacteria as spores. Many methods have been elaborated for obtaining beautiful double ‘staining of the spores within the rods, the impermeability of the spores being over- come by boiling them in the staining solution, or by submitting them to the action of substances like chromic acid, which render the spore-membrane more penetrable, either by causing it to swell up, or more probably by dissolving out certain constituents. The question whether any given structure is a spore cannot, however, be decided merely by its colour reaction—germination is the only reliable proof. 22 MORPHOLOGY As soon as the spores are ripe they are capable of germination, and in a dried state remain so for many years. This property is not peculiar to the spores of bacteria: well-dried wheat germinates after being kept for twenty years, and the spores of the smut-fungus may lie in a herbarium for eight years and not lose their vitality (see Chap. VIII). Moistening with pure water is not sufficient to cause germination of bacterial spores. A solution capable of setting up a nutritive stimulus is necessary, and, of course, a suitable temperature. . The first stage of germination is the slow swelling up of the spore, which gradually becomes less and less refractive (Fig. 11, g 2, # 2, 7 3). In B. subtilis this phase lasts from one to three hours. Then the spore- membrane bursts open at one point, and the contents, surrounded by a delicate cell-wall, are protruded, and elongating soon assume the form of a rod, the new bacillus (Fig. 11, 4 2-6). The end of this often bears for a long time the ragged remnants of the spore-membrane. Germination is now complete, the whole process having taken about four or five hours. One peculiarity connected therewith is worthy of remark. The spores of B. subtilis are in shape short ellipsoids, having the longer axis parallel to the longer axis of the cell that gave them birth. The new rod, on germination, bursts through the side of the spore, and stretches itself at right angles to the latter (Fig. 11, % 5), so that the longer axis of the new generation crosses that of the old. The spores of B. axthracis and of Clostridium butyricum, on the other hand, burst open at the end, so that the axes of the new and old generation are continuous. Both these types of germination are common among bacteria, but they are constant for the same species, and therefore can be used for purposes of classification. The simplest germinative process is that shown by some harmless saprophytic bacteria (e.g. B. leptosporus), where the spore itself grows out without casting its membrane into the new bacillus (Fig. 11, z). In this case the unchanged spore-membrane becomes the cell-wall of the young rod, whereas in B. anthracis, B. subtilis, and Clostridium butyricum the coat of the spore splits into two layers—an outer, which is left as the empty membrane, and an inner, which ensheathes the protruding contents of the spore and becomes the cell-wall of the new-born bacterium. The spores of many fungi also germinate in this way. De Bary (18) has described, under the name of arthrospores, structures which have given rise to a great deal of misunderstanding. He gave this name to certain cells in filamentous bacteria, such as Cladothrix (Fig. 12), Thiothrix, &c., which detach themselves from their fellows and swim about after the manner of swarm-spores, finally growing out into filaments again. They are certainly reproductive cells (Gonidia), and may perhaps be termed spores, in so far as a spore is subservient to reproduction. De Bary called them arthrospores because they are formed from one joint or cell in the SPORES AND SPORULATION 23 cell-chain, but they possess none of the essential properties of aspore. They are simply detached vegetative cells without special powers of resistance and destitute of any lasting germinative faculty. Another kind of arthro- spore is said to occur in the case of Leuconostoc, where certain cells generally larger than their neighbours surround themselves with a very thick mem- brane, and without further preparation enter the ‘resting stage.’ Similar cases occur among the blue-green algae, but are quite unknown among ordinary bacteria. What have been described as arthrospores in bacteria (in cholera cultures, for instance) are in all probability nothing but deeply- staining granules from the detritus of old cultures. They have never been seen to germinate. Bacterial arthrospores, if the term were justified, would be of the same shape as the vegetative cells of the species to which they belonged; the cholera arthrospore appearing as a curved refringent rod, that of B. violaceus as a straight cylinder, &c. Of the causes which bring about sporulation very little can be said. As with other organisms, it seems to be induced by an unfavourable environ- ment, arrest of food supply, or the accumulation of the excretory products of the bacteria themselves. In pathogenic forms, at least in those cases that have been carefully studied, spores are not produced so long as the bacteria are enclosed within the diseased tissues. The anthrax bacillus forms them only in places where there is free access of air—in the excre- tions of diseased cattle, for instance, or on the surface of the carcase ; never inside it, either before or after death (see also Chap. XVI). CHAPTER III TAXONOMY The Question of ‘Species’ among Bacteria; Variability; Involution and Attenuation; the Classification of Bacteria. DESPITE the morphological sameness of the bacteria, the functions they perform in the economy of nature are numberless. When their extra- ordinary versatility first became known, the idea arose that they were beyond the influence of many of the laws of life which govern all other organisms. Any opinion regarding bacteria, however absurd it might be, was permitted, and even the existence of definite species among the bacteria was denied. The controversy on the species question has been long and heated, and only in the last few years has it been decided once for all that the conceptions of genera and species are as justifiable among the bacteria as among other organisms. The subject-matter of the whole discussion may be summed up in two words: pleogeny or mutability of function, and pleomorphism or mutability of shape (14). The pleomorphists maintained that a coccus did not necessarily remain a coccus all its life long, that it could, under certain conditions, stretch itself and assume the shape of a bacillus, that this again could become curved and change into a vibrio, to return again later on to the coccus form that it commenced with. Words like Micrococcus, Bacillus, Vibrio, Spirillum, which we now know to have a definite taxonomic value, were in the eyes of the pleomorphists worthless designations of transient changes of shape. As an example of almost inexhaustible versatility the branched aquatic bacterium Cladothrix dichotoma was advanced. But it has now been proved to be not truly pleomorphic (15), Only at the season of reproduction, for the purpose of securing new fields of growth, does the cell undergo change. It loosens itself from its fellows in a filament, develops a tuft of cilia, and emerges from the sheath (Fig. 12). The bacillus-like gonidia or swarm- spores thus produced settle down sooner or later upon some solid body, to which they adhere, and then grow out into new filaments. Neither coccus, PLEOMORPHISM : INVOLUTION 25 vibrio, nor spirillum forms appear. The various twistings and distortions of filaments, and aggregations of motionless gonidia, which have been described as phases of pleomorphic development, are quite fortuitous. Pus-cocci (Staphylococci) may be cultivated in any number of different media, but they appear with unalterable persistence in the form of little spheres (Fig. 28,2). The cholera vibrio occurs in the form of a slightly curved rod, and it occurs in this form only. The only observable variation in growth is that in some cultures isolated cells may prevail, and in others chains (Fig. 28, 2). In a hay-infusion culture of B. subtilis, for instance, we meet side by side motile and motionless single cells (Fig. 13, a, 4), and, especially in the surface pellicles, motile and motionless chains (Fig. 13, 4). In all these the individual bacterium remains unchanged, a unicellular, peritrichous-ciliate, actively motile rod (Fig. 13, a). The motionless rods arise from any causes which bring about temporary paralysis of the cilia, and the motile chains from the clinging together of successive genera- tions of cells. In a fresh culture the fluid is uniformly turbid, with actively moving isolated rods only. These are afterwards driven by lack of oxygen to the surface of the culture, where they grow out into long, motionless, — Fic. 12. Cledothrix dicholoma, spore-bearing chains devoid of cilia, the aggre- Seat ugg. Of the ele bean : . i if has opened and gives exit to a swarm gation of which forms a membrane or pellicle spore; in the right branch a whole igi *: group of cells has changed into swarm on the surface of the liquid. This completes spores, each with a lateral tuft of cilia. in this side too the sheath is swollen the cycle of forms. up, loosened, Magn. 1000. These instances will suffice to show that pleomorphism in its true sense does not exist. In all the simple bacteria (haplo-bacteria) the ‘growth-form’ only changes. Single cells unite to chains, clusters, or zoogloea, according to the substratum they live in, but the form of the individual of the vegetative cell remains the same. That proper and improper nutriment must have a great effect upon the size of the cell is evident. Giant and dwarf forms occur among the bacteria as among all other organisms, and have the same significance. But for all species of bacteria there is an average size and form, deviations from which are not more extensive than they are among other organisms : always assuming that the conditions of existence are suitable, that the bacteria are in a healthy condition, which is far less frequently the case than we are apt to think. Imagine a few thousand animals cooped up together in a confined space, plentifully supplied with food, but without provision for the removal of their dejecta. A few hours would suffice to bring about a frightful state of things. And these are just the conditions under which 26 TAXONOMY the bacteria are living in agar cultures, in all our culture media in fact. In such circumstances it is no wonder if some of the cells grow into mis- shapen, feeble involution forms, with their physiological functions, such as virulence or fermentative power, weakened or suppressed (16). Bacteria, like all other living things, produce crippled and deformed individuals when forced to live under unsuitable conditions (Fig.14). These abnormal bacterial cells are known as ‘involution forms.’ The causes of involution are of various kinds. Acetic bacteria, for instance (Fig. 14, cd), produce monstrosities if their own fermentation product (acetic acid) accu- mulates beyond a certain point, and also if the temperature exceeds the optimum. In &. sudzzlis involution forms arise if the relative propor- tions of nitrogen and carbon in the culture medium are not suitable—a solution of o-I per cent. asparagin and 10 per cent. sugar, for instance. In other cases a high percentage of neutral salts induces them. A curious case of involution is that shown by the bacteria in the root tubercles of the leguminosae (see Chap. X). The shapes that the cells assume are very varied. Irregular, swollen, or spindle-shaped rods and twisted chains are common, and the protru- sion of short lateral processes from the cells often gives the growths the Fic. 13. Bacillus subtilis in hay infusion. The pale shows the fel cycle of forms. a, Peritri- appearance of a branched system c ‘od; ous motile short r: 4, non-motile rods and chains A a motile chains; ¢, spores in non-motile rods and (Fig. 14). At the same time the chains that unite on the surface of the infusion to form 2 cic aa pellicle ¢. Magn. a-d 1500, e from cel|-contents are reduced and stain badly, a few granules being appa- rently all that is left in the cell. Cells which show a high degree of involution are dead, and cannot, even in the most favourable conditions, be revived. They are common in old cultures, and particularly so in those of strictly parasitic forms, such as the diphtheria and tubercle bacilli, that even in the most nourishing media do not find quite the conditions they require. Such branched involution forms have been thought by some to show that the bacteria of diphtheria and tubercle (Fig. 14, %, g) are fungi of a higher order of growth than their ordinary rod form would indicate. It has been suggested that the rods are merely a stage in the development of a true filamentous bacterium or even a hyphomycete, and new names have accordingly been given to the organisms, the tubercle bacteria being placed INVOLUTION: ATTENUATION 27 in a new genus Mycobacterium or Tuberculomyces, and the diphtheria para- site in another, Corynebacterium. In the writer’s opinion such an alteration is not justified, for the branched forms of tubercle bacillus that arise in three to six months old colonies are by no means common, and agree closely in appearance with the involution forms in the root-nodules of leguminosae Fig: 14, e—/, and of the acetic bacteria Fig. 14, c-d. If the influences which give rise to involution forms be restrained within certain limits, a general weakening or attenuation of the bacteria is 20 x ! Fic. 14. Involution forms. a, Bac. sub¢lis from a four-days old culture containing 1 % sal ammoniac, 2% grape sugar, and o-5 % nutritive salts (weakly acid). 4, Typhoid-like bacilli from water in hay infusion with 4 % sal ammoniac; they are non-motile, without cilia, and suggestive of the bacteria of root-nodules (e and /). c, Bac- terium acet? at 39°-41° (from E. Chr. Hansen). d, Bacterium Pasteurianum, 7 hours at 34° (from Hansen). ¢, Bac- teroids from the root-nodules of Vécéa villosa ; the round spots are the still retainable remnants of cell-contents (from Morck). a Bacteroids from Lupznus albus (from Morck; the four-armed one is from Vicia villosa). g, Tubercle bacillus, branched filament from sputum (from Coppen Jones). 4, Diphtheria bacilli, so-called branched forms ; they are certainly involution forms (from Bernheim and Folger). Magn. @ and 4 1500, c and d@ 100, e and fabout 1500, g 1250, 4 about 100. effected. This condition arises spontaneously in long-continued cultivation on artificial media ; virulence, fermentative power, and other functions being diminished. They may be revived again, however, if the process has stopped short of involution, by restoring the bacteria to a more natural environment: in the pathogenic species by repeated passage through the animal body, in the ferment organisms by giving them renewed oppor- tunity for active fermentation. The attenuation induced by prolonged artificial culture can be secured in a much shorter time by exposure to more noxious agencies. The most important form of enfeeblement, the loss of infectious power, can be induced 28 TAXONOMY by almost all operations injurious to life, if only the proper degree of strength be chosen. Anthrax bacilli are attenuated by a few hours’ exposure to direct sunlight or by the addition to the culture media of o-1- 0-2 per cent. phenol. Trichloride of iodine is effectual in the case of the diphtheria and tetanus bacilli. By careful exposure to high temperatures, Pasteur was able to produce a less virulent breed of anthrax bacilli which retained their acquired characters for a long time (17). The change effected was the same whether the cultures were maintained at 425°C. for twenty- eight days, at 43° for six days, at 47° for four hours, or at 52° for fifteen minutes. The temperature optimum for Bac. anthracis is between 30° and 37°, the maximum about 42° or 43°, and the lethal limit lies between 50° and 60°, so that it is evident that attenuation is effected the more quickly the nearer the temperature approaches the lethal limit. That the decrease of virulence is only one phase of a general weakening of all the functions is shown by the fact that the bacteria in attenuated cul- tures have lost the power of forming spores: have become asporagenous (18). At first sight this seems to be a result of the greatest importance. Spore formation is one of the principal morphological features of the cell. If we were really able to suppress it, and to suppress it so successfully that it never made its reappearance even in the most vigorous cultures, we should indeed have done a great thing, for we should have obtained nothing less than the long desired proof of the hereditary transmission of acquired charac- ters. But appearances, alas, are deceptive. It is no more possible to obtain in this way a breed of sporeless anthrax bacilli than it is to rear a tailless race of mice by incessantly cutting off their tails. All we do is to hinder the production of fully ripe, resistant spores: rudimentary spores are formed, We attain nothing more than a general enfeeblement of the cell affecting all its functions equally. This is proved by the fact that such ‘attenuated’ and ‘sporeless’ cultures get weaker and weaker and finally die. By the inoculation of the weakened bacteria into suitable animals and several passages through the body, in short, by a dracing treat- ment, virulence is restored and resistant, fully ripe spores appear again. The micro-organisms behave, in fact, just as sickly plants do when removed to healthy surroundings. The importance of the experimental modification of virulence for the attainment of artificial immunity will be considered in a later chapter. All these considerations show us that external agencies (in the brief period which our experiments allow) are unable to bring about a lasting, hereditary change in the structure of bacteria. The morphological characters remain constant. The variety always throws back to the typical form, the concep- tion of species and genera having the same value among bacteria as among the higher organisms. Billroth’s views, according to which all the bacteria occurring in an infected wound were different developmental stages of the PLEOGENY 29 same species (Coccobacteria septica), can be no longer held. Like Zopf’s far-reaching speculations on the cycle of forms among bacteria, they are matters of history, and they are nothing more. The similar ideas of Nageli have been unable to hold out in the face of more recent dis- coveries, and there can be no doubt that the justification of Cohn’s original conception of the possible systematic classification of the bacteria is now generally recognized. Less simple to decide than the question of pleomorphism is the question of physiological change or pleogeny*. All bacteria possess to a certain extent the power of living on different kinds of substrata, and the com- position of these determines in a great measure the nature of the chemical changes which the bacteria set up. According to the degree to which this power is developed, we may conveniently divide the bacteria into two classes, the ~onotrophic and the polytrophic. Among the members of the first group the requirements of nutrition are specific and clearly defined. The composition of the substrata may vary only within very narrow limits, and, as a result, the metabolic products also of these bacteria and the func- tions they are able to perform are specific and well defined. As typical examples of the monotrophic group may be mentioned the sulphur bacteria, the nitrifying organisms, all the truly parasitic bacteria, and those found in the root-nodules of the leguminosae. Among the great host of ferments and putrefactive organisms, too, there are monotrophic forms with specific properties. Such are the bacteria of the acetic, lactic, and some butyric fermentations, and the bacteria which decompose urine (urea ferment). Some of the butyric bacteria, on the other hand, are polytrophic, and, besides possessing specific fermentative powers, are able to break up albuminous compounds; they are saprogenic as well as zymogenic. Others of the same class are pathogenic also, and can live in the tissues of the animal body (malignant oedema, quarter evil). We find, too, forms like B. vulgaris with pronounced saprogenic (putrefactive) powers, which are yet able to grow on non-putrefactive substances and cause them to ferment. Again, many saprophytic bacteria are unable to exist in the animal body, while others (typhoid, cholera) are decidedly polytrophic in this respect, and multiply rapidly in the tissues. It is not necessary to give parallel examples of differences among other organisms. As might be expected, it is in monotrophic forms that the ‘ specific characters,’ both morphological and functional, are most sharply marked. But they undergo no lasting change even in those bacteria which are physio- logically the most versatile; and the attainment in our cultures of new varieties, varieties with acquired characters that are permanent and heredi- tary, is not to be expected. We are able, it is true, to obtain cultures of * Detailed instances will be found in Chaps. V, XI, XII, XIII, and XV. 3° TAXONOMY pathogenic species with every desirable gradation of virulence, but they are not new varieties. They are mere laboratory stocks, which revert at once to the original type as soon as the original conditions of life are restored*, It has not been hitherto possible to entirely suppress a single biological character in any species. The supposed conversion of the anthrax bacillus into the harmless B. subtilis was never realized, and, like most reports of a similar character, arose from imperfection in the technique of pure culture. Although there is no longer any doubt that the various kinds of bacteria constitute definite species and genera, it would be futile to minimise the great difficulty that confronts us as soon as we try to arrange them in a system of classification. The morphological similarity of the spherical forms (cocci) and the close resemblance to each other of the rod-shaped bacilli make a classification based on purely morphological data quite impossible. Physiological characters have therefore been made use of as auxiliaries—for instance: growth on various media and need for oxygen or particular forms of nourishment; specific products such as pigments, granulose, sulphur, fluorescence, phosphorescence ; specific chemical changes such as fermentation, putrefaction, disease. A reliable description of the species of bacteria is a task for the future, and will only be attained by the united labours of pathologists, physiologists, chemists, and botanists (19). Much has been done by arranging them in groups according to their most prominent physiological characters. Examples of such groups are the saprogenic or putrefactive, the zymogenic or fermentative, the chromogenic or pigment-producing, the phosphorescent, the thermogenic, the nitrifying, the iron bacteria, and the sulphur and purple bacteria. Such a classification is not without value, but it is not justifiable to make generic names on this principle, and use them as though the groups they indicate were equivalent to true morphological genera. Such names as Photobacterium, Nitro- bacter, Nitrosomonas, Granulobacter (for butyric bacteria with the granulose reaction), Halibacterium (for marine forms), Gonococcus, and Proteus (for several putrefactive bacteria) are names that should not be admitted in a systematic classification. As working or trivial names they are useful enough, but have no claim to equality with genera based on morphological characters, which must, after all, form the ground-work of all systems of classification. An attempt must be made, despite the dearth of material, to obtain clear morphological definitions of the genera at least, even if it be impossible at present for species. This was Cohn’s guiding principle (20), and must be adhered to, The very factor to which the progress of bacteriology is mainly due, namely the number and variety of its students, has been a hindrance to the proper growth of a classification. Side by * The various ‘ races’ of brewery yeasts have a different value to these ‘ attenuated’ bacteria. BAR ec raaay cepa a I a CLASSIFICATION 3I side with the medically trained ‘ bacteriologist,; to whom the principles and meaning of classification were unfamiliar, there have been investigators from every other branch of biology—brewers, agriculturists, and even chemists, all vying with each other in the manufacture of species. It is not argued for a moment that botanists alone have the right to set up a system; but it cannot be too often repeated that other investigators, if their taxonomic schemes are to be of any value, must proceed on the recognized and established principles of classification. As things are, there is no agreement even as to the value to be attached to the few clearly marked morphological features which do exist. The only point of unanimity is the adoption of Cohn’s groups founded on the shape of the cell (coccus, rod, spiral, or filament). The importance of the distinction between fila- mentous bacteria and those forms which consist of a single cell deserves more emphasis than it usually receives. The filamentous bacteria, zricho- bacteria, constitute an order, separate from the haplobacteria, in which the colonies of cells are mere ‘growth-forms’ or social aggregates of individuals, such as, for example, the packets of Sarcinae, or the cobweb-like zoogloea of B. vulgaris. The power of movement or its absence has very properly been regarded as a distinctive feature, but the constancy of the ciliation (mono-, lopho-, peritrichous) has been undervalued. A cholera vibrio or a bacillus pyocyaneus has only one flagellum (as a rare exception two); the typhoid bacillus, B, subtilis, and many others are always peritrichous. Lophotrichous forms like the spirilla and other aquatic bacteria, or the bacillus of blue milk (B. syncyaneus), always have a polar tuft of cilia, the number of which is approximately known and fairly constant. That their numbers in a stained preparation are often irregular is due to the delicacy of the structures, which are easily thrown off, and not to any original irregularity. In the motile bacteria, as in the flagellate infusoria, the number and arrangement of the cilia are morphological characters of fundamental systematic value. Another is the form of the sporulating rod, which, although described by some as variable, possesses in reality the constancy required of systematic characters. The anthrax bacillus retains its cylindrical shape, the tetanus bacillus becomes invariably swollen at one end, like a drum-stick (f/ectron), and some of the butyric bacteria assume the shape of a spindle at the time of spore- formation. Exceptions to the rule are generally deformed individuals, and are very rare, not one ina hundred. A careful discrimination of these two characters, ciliation and sporulation, enables us to arrange the chaotic multi- tude of rod-shaped bacteria into a few well-defined genera and sub-genera. It may be argued that in many cases the spores are unknown. This is true, but it is no reason why we should not classify the better known forms into ‘good ’ genera, relegating the others provisionally, according to the shape of their cilia, to genera where the sporulation is unaccompanied by change 32 TAXONOMY of shape in the rod. The names of the genera might be formed con- veniently in such a way that the root of the word indicated the shape of the cell, and the termination the arrangement of the cilia. The root-words might be daktron (rod), kloster (spindle), and plectron (drum-stick), and the terminations -2zium for monotrichous, -2//um for lophotrichous, and -zdiam for peritrichous types. The classification of the less numerous spirilla is, as the table shows, a simpler matter. Among the Coccaceae the manner of cell-division has already been employed as a generic character, but greater weight should be attached to the contrast between two more comprehensive groups into which they naturally fall. These are the Homoccocaceae, where the planes of fission follow a definite sequence, and the AJdlococcaceae, in which such regularity is not found (see pp. 18 and 19). The different meanings attached to the words Bacillus and Bacterium deserve notice. In two of the most recent systems of classification (21) the senses in which they are used have little in common. Lehmann and Neumann apply the word Bacterium to all rod-shaped forms in which spores are unknown (a point in regard to which any day may bring a change in our knowledge), the genus Bacilius embracing those in which spores have been found. Of the manner of ciliation no notice is taken. Migula, on the other hand, uses the term Bacterium for all non-motile rods, and Bacillus for peritrichous species, the remaining motile forms, both lophotrichous and monotrichous, constituting a new genus, Pseudomonas. This classification very properly regards the presence or absence of spores as unimportant ; but the shape of the spore-bearing rod is neglected, and no distinction is made between monotrichous and lophotrichous species. Perhaps the best plan would be to drop altogether the word Bacterium as a generic term, seeing that it is now used as a collective name for the whole group of micro- organisms. The word Bacz//us might then be used, in memory of Koch’s first work, for all those species which, like the anthrax parasite, are non- motile and retain their shape during sporulation. At present we are not justified in regarding the presence or absence of capsules as sufficiently important to constitute a generic character, although very useful for the differentiation of species, The trichobacteria are so few in number that it will suffice at present to unite them in a single family representative of another order. Based on the characters that have been under consideration, a classifi- cation of the bacteria might be arranged as follows :— Order 1. HAPLOBACTERINAE. Vegetative phase unicellular, spherical, cylindrical, or spirally twisted; isolated or, united in chains or clusters. Family 1. COCCACEAE. Vegetative cell spherical. CLASSIFICATION 33 Sub-family 1. Alococcaceae. Planes of fission without definite sequence; no pronounced colonies or growth- forms, cells isolated or in short chains or irregular clusters. Genus Micrococcus, Cohn. Non-motile. Includes most cocci, the pathological ‘staphylococci,’ &c. Genus PLANOCOCcCUS, Migula. Motile. Spb-family 2. Homococcaceae. Planes of fission in definite sequence. Genus SARCINA, Goodsir. Three planes of division at right angles to each other, Cubical colonies, non-motile. : Genus PLANOSARCINA, Migula. Similar to Sarcina, but monotrichous, ciliate, and motile, Genus PEDIococcus, Lindner. Two planes of fission, alternate and at right angles. Micrococcus tetragenus, Thiopedia (a sulphur organism), and probably some species usually termed micrococcus, Genus STREPTOCOCCUS, Billroth. Planes of fission parallel, giving rise to chains; the pathological S¢reptococct and Leuconostoc. Family 2, BACILLACEAE. Vegetative cell straight, cylindrical, ellipsoidal or egg-shaped; very short forms difficult to distinguish from cocci. Fission always transverse. Sub-family 1. Bacilleae, Spore-forming rods cylindrical, unchanged. Genus BACILLUS, Cohn. Non-motile. 2. anthracis, B. diphtheriae, &c. Genus BACTRINIUM, A. Fischer. Motile, monotrichous, with terminal cilium: includes provisionally all monotrichous rods whose spores are as yet unknown, e.g. Bac. pyocyaneus, Genus BACTRILLUM, A. Fischer. Motile, with lophotrichous ciliation. Includes provisionally Bac. cyanogenus, and many other sporeless forms. Genus BACTRIDIUM, A. Fischer. Motile, peritrichous, in some spores as yet un- known. Very numerous representatives, e.g. B. subtilis, B. megatherium, B. vulgaris (old genus Proteus), B. tyfhz, and B. colz. Sub-family 2. Clostridieae. Rods spindle-shaped during sporulation. Genus CLOSTRIDIUM, Prazmowski. Motile, peritrichous; includes some of the butyric bacteria. Genera with monotrichous and lophotrichous ciliation are unknown as yet. Sub-family 3. Plectridieae, Rods drum-stick-shaped during sporulation. Genus PLECTRIDIUM, A. Fischer. Motile, peritrichous; some butyric bacteria, the parasite of tetanus and a methane ferment. FISCHER D 34 TAXONOMY Family 3. SPIRILLACEAE. Vegetative cell cylindrical but spirally twisted. Fission always transverse, Genus VIBRIO, Miiller and Léffler. Very slightly curved rods, ‘comma’ shaped; motile, monotrichous. Vibr.o cholerae astaticae and numerous other vibrios of fresh and salt water. Genus SPIRILLUM, Ehrenberg. Cylindrical cells twisted in an open spiral ; motile, lophotrichous. Spirillum undula, Sp. rubrum. Genus SPIROCHAETE, Ehrenberg. Cells long and attenuated, spirally twisted with numerous turns; cilia unknown; the cell membrane is perhaps yielding. Spirochaete Obermaieri (remittent fever). Order 2. TRICHOBACTERINAE. Vegetative phase an unbranched or branched filament or chain of cells, the indi- vidual members of which break off as swarm-spores (gonidza). Family 1. TRICHOBACTERIACEAE. (2) Filaments non-motile, rigid, enclosed in a sheath. Genus CRENOTHRIX, Cohn, Filaments unbranched and devoid of sulphur granules, Genus THIOTHRIX, Winogradsky. The same, but containing sulphur granules, Genus CLADOTHRIX, Cohn. Filaments branched, false dichotomy (includes Sphaerotilus). (4) Filaments motile, with oscillating and gliding movements, and devoid of a sheath. Genus BEGGIATOA, Trevisan. Containing sulphur. For the genus Streptothrix see next chapter. Further particulars as regards the discrimination of genera and species will be found in the works quoted in Appendix (No. 3). CHAPTER IV TAXONOMY (continued). Tho Systematic Position of Bacteria; Other low Organisms with Pathogenic Properties. A QUESTION often asked is, whether bacteria are animals or plants? Now the terms ‘animal’ and ‘plant’ are collective terms invented by laymen to describe familiar living things, insects and elephants, mosses and oak trees, and they date from a time when such minute beings as bacteria were quite unknown. It is therefore as superfluous as it is futile to attempt, as many have done, to detect the distinguishing characters of the ‘ animal’ and ‘vegetable’ kingdoms among organisms for which these terms were never intended. For this reason Haeckel and others have proposed to establish a third domain, that of the Protista, which shall include all those forms in which differentiation has not been pronounced on the lines of either animal or plant development. The new group would take up Radiolarians, Flagellata, and Infusoria from the animal side, and the Cyano- phyceae as well as some low forms of Algae and Fungi from the plants. The border line between protista on the one hand and plants and animals on the other, is, it must be confessed, artificial. To these protista, which embrace approximately all those forms of life we commonly call micro- organisms or microbes, the bacteria belong. Another question almost as common as the first is, whether bacteria are fungi, as the synonym Schizomycetes or fission-fungi would seem to’ imply. As far as the processes of life are concerned the bacteria and fungi agree in every detail, for, with very few exceptions *, the members of both groups are unable to derive their nourishment from inorganic compounds. That is to say both bacteria and fungi are metatrophic, are restricted in their food to substances fabricated by the higher organisms. Some of them are even * The saltpetre bacteria and others. D2 36 TAXONOMY paratrophic, that is, are able to exist only upon living animals or plants. But in spite of the many points of physéological similarity between fungi and bacteria there are very wide morphological differences. In every fungus, be it a mushroom, a morel, a mildew (Fig. 15, c), a smut-fungus, or an animal parasite, like Herpes, we can always recognize two distinct parts, the mycelium or vegetative section, and, arising from this, the spore-bearing or reproductive section. The mycelium is in all fungi an irregularly felted mass of branched filaments, the Ayphae, which in many cases (e.g. Penicillium, Fig. 15, c) consist of cylindrical cells set end to end, each cell having much the appearance of a rod-shaped bacterium. The fructification is of varying degrees of com- plexity, from isolated cells or chains of cells (Fig. 15, c) among the lower fungi Wi SS ATS Se pale wr Fic. 15. A, Oscéllaria tenuis (one of the Eyenaphiyeras!, fragment of filament; cZ, hollow cylindrical chromato- phore ; ¢, so-called central body, finely vacuolated protoplasm with deeply-staining granules (black). 3B, Polyfoma xvella, flagellate with two anterior cilia; v, contractile vacuole; &, nucleus; 4, membrane, cell contents filled with assimilation products pee) Cc, Penicillium glaucum (true fungus, mycomycete), mycelium has arisen from te ao @; on aerial hyphae brush-like fruits with chains of conidia. Magn. a 2250, 4 about 600, ¢ (from refeld) 120. up to the highly complex sporophores of the toadstools and mushrooms. Upon a suitable soil the mycelium is able to vegetate for long periods, continually producing new reproductive cells or fruits. Among the bacteria such a differentiation is nowhere to be found. Their vegetative phase is either a single cell or a cell filament on which special reproductive organs are not developed but which, like Cladothriz, breaks up entirely into gonidia. When the reproductive organs, the spores, appear, the vegetative cell as such ceases to exist. As in the myxomycetes and many other protista, it is entirely used up in the formation of the reproductive cell. The bacteria may therefore be termed holocarpous, as contrasted with the fungi which are excarpous, that is to say, able to produce several successive fructifications from the same vegetative thallus. Failing to find the kindred of the bacteria among the fungi we must seek them among those low organisms which we have named collectively CYANOPHYCEAE 37 the protista. Of these, two groups in particular deserve careful attention, the blue-green algae or Cyanophyceae, and the Flagellata. The Cyanophyceae present in their outward configuration many points of resemblance to the bacteria. We find spherical cells (Chroococcus), rods (Aphanothece), \ong cell chains or filaments (Oscillaria), and spirally twisted unbranched forms (Spirulina). As among the bacteria, too, colonies or ‘ growth-forms’ occur; some like sarcina (Glococapsa), others in flat plates (Merismopoedia), while sheath-bearing bacterial species like Cladothrix find their parallels among the Scytonemeae (Tolypothrix) with their dichotomous false branching. But it must not be forgotten that these striking similarities: to the bacteria are not confined to the Cyanophyceae; the chlorophyll- bearing algae offer a like series of parallels. The powdery green coating seen on the north side of tree-trunks, &c., consists of minute, free-living spherical cells (Pleurococcus), pools and ditches are often coloured green by myriads of rod-shaped species (Stichococcus), the curved vibrios have their analogy in the gracefully-formed Raphidia, and examples of sheathed filaments and’ capsulation are not wanting. This is not surprising, for free-living cells must have the form either of spheres or cylinders, and the simplest cell unions must be filaments, flat plates, or packets. The similarity of external configuration is only a superficial similarity and in no way justifies a systematic approximation of the two groups. The cells of Cyanophyceae, whether free-living (Chroococcus, Aphano- thece) or united to form filaments, multiply like all other cells by division, just as do the bacteria. Just as these, too, do the isolated Cyanophyceae ‘split off’ from their sister cells. And for this reason, supported by the not less superficial one of resemblance in shape, the bluish-green algae (‘ Schizophyceae ’) have been placed alongside the ‘ fission-fungi’ (‘ Schizo- mycetes’) to form a separate class of plants, the ‘Schizophyta.’ But the ‘fission’ of these organisms is not peculiar to them, for it must always occur when isolated unicellular organisms divide; and the opinion that the bacteria are a series of colourless organisms parallel to the schizophyceae is not well founded. The differences between the two groups are as numerous as the similari- ties. The Cyanophyceae, if we except the gliding movements of the Oscillariae, are non-motile, whereas a large proportion of the bacteria are actively motile and possess special locomotive organs, the cilia. These are moreover present not only at the time of reproduction, but persist throughout the life of the cell, The sporulation of the two groups is also different. The Cyanophyceae form not endospores but arthrospores, which arise by the differentiation and enlargement of a whole cell. In the finer structure of the cell again there is but one detail which the Cyanophyceae and bacteria have in common, the absence of a nucleus. In other respects the cells of the Cyanophyceae are much more highly differentiated than those of bacteria. 38 TAXONOMY The bluish-green colouring matter is borne bya special organ, the chromato- phore (Fig. 15,a@: ch), generally having the shape of a hollow cylinder or sphere, forming the outermost layer of the cell-body and enclosing the remaining cell contents (Fig. 15, a,c). The central mass stains deeply, and thus has somewhat the appearance of a nucleus. We are, however, no more justified in describing it as a nucleus than in calling the strongly-stained granules in the protoplasm ‘nuclear chromatin.’ As in the case of the ‘chromatin grains’ of bacteria, the nature of these substances is unknown. In no bacteria, not even in the chromogenic species, is such a differentiation of the cell contents to be observed. If we now turn to the Flagellata we find among them also many points of similarity to the bacteria. In a species like Polytoma uvella (Fig. 15, 4), for instance, often found in stagnant waters, we have an egg-shaped cell enclosed in a definite membrane (%), and provided with a pair of permanent polar cilia or flagella. Other forms, such as Jonas, are ‘monotrichous,’ others again, like Tetvamitus, have a brush or tuft of cilia at the anterior end of the cell. The process of ‘encystment,’ too, closely resembles the formation of endospores, the cell-contents contracting and secreting a new membrane, the cyst or spore thus formed being set free by the disintegration of the membrane of the mother cell just as are the endospores of bacteria. But notwithstanding these points of likeness the Flagellata differ from the bac- teria in one fundamental feature: ¢hey possess a definite nucleus (Fig. 15,6: k) like that of the cells of higher organisms. It is therefore evident that we have as little right to assume a close genetic relationship between bacteria and Flagellata as between bacteria and Cyanophyceae. The view most in harmony with observed facts is that which looks upon the Bacteria as a distinct group of protista, simpler in structure than the rest, and showing affinities to both Cyanophyceae and Flagellata. We might regard the bac- teria as the more direct descendants of the ancestral stock from which these arose, the differentiation of a chromatophore leading to the Cyanophyceae and the development of a nucleus as well as the general attainment of motile power giving rise to the flagellate phylum. Among the arche-bacterial types there may well have been both motile and non-motile forms which would have been respectively the starting-points of the two branches, whilst capsulation, the production of cell-chains or filaments, and other colonial or growth forms were primitive acquirements which have reappeared again among the Cyanophyceae and Flagellata and undergone greater specialization. The protista (sicro-organisms), the simplest living things, among which we have tried to indicate the place of the bacteria, are not only manifold in form, but have very different modes of life and exercise a great variety of different functions in the economy of nature. Asa general rule, these physio- logical features are not so conspicuous among the other groups as they are SACCHAROMYCES: AMOEBAE 39 among the bacteria, but they become so when vigorous growth and suitable conditions of nourishment allow them to multiply rapidly. Such instances as the yeasts and the mould-fungi, with their energetic chemical effects, suffice to remind us that the bacteria are not alone in their performances. Some of these low organisms (22) are, like the bacteria, capable of pro- ducing pathological effects, but it is very rarely that such cases present the characters of a genuine infectious disease. Only within the last few years has it become known that the yeast-fungi (Saccharomycetes, see Chap. XIV) are capable of developing pathological properties. Injection into animals of pure cultures of different species of brewery and distillery yeasts gives rise to processes having all the characters of true parasitic diseases, ending in many cases with the death of the animal. The germs spread to distant parts of the body and are found in all the organs as well as in the blood, but the lesions produced have not been recognized as those of any known disease in human beings. Still, an infection by yeast cells is just as con- ceivable as by any other organisms. It has recently been suggested that the various forms of cancer and similar neoplasms may be due to parasitic saccharomycetes, and some investigators have announced the discovery of such in stained sections. Unimpeachable results have however not been as yet attained, and it has been shown in some cases that the supposed para- sites were nothing but fragments of cells and nuclei of the tissues themselves. The parasitic nature of tumours is indeed denied by some pathologists. The thrush fungus (Saccharomyces albicans of some authors) found on the buccal mucous membrane of children belongs possibly to the saccharomycetes. Its elongated cells have much the appearance of a yeast and they multiply by budding in the same way, giving rise to mycelium-like masses which cover the culture fluid with a thick pellicle. They set up, too, in suitable media (beer-wort) weak alcoholic fermentation. Whether these masses are true mycelia or not is uncertain, and it is therefore doubtful whether the fungus should be classed among the yeasts or with such hyphomycetes as Ozdium and Monilia candida, Some of the closely allied group of Flagellata occasionally occur as parasites or messmates in the animal body (e. g. Mastigophora) which, as we have seen, have alliances to bacteria, but it has not yet been demonstrated that they are ever pathogenic. Zyrichomonas vaginalis is sometimes found, associated with other micro-organisms, in the mucous secretion of the vagina. th of a milligram of solid matter. Rain-water is contaminated with bacteria which it has taken up in its passage through the air; one sample contained thirty- five germs per litre. The water of rivers, lakes and springs contains very varying numbers of micro-organisms, their abundance depending largely upon the amount of organic matter present. As soon as water is rendered impure by the influx of such substances as are carried into rivers by sewers and drainage canals, it ceases to be merely a liquid in which bacteria can retain their vitality for a long time unimpaired, and becomes a nutritive medium in which they proliferate with great rapidity. The water of the Spree for instance contained, above Berlin, on an average 6,140 bacteria per cubic centimetre, that taken below the city no less than 243,000. The bacteriological analysis of water is a very simple process, If the microscope shows that bacteria are not too numerous, a measured quantity of water (generally 1 c.c.) is mixed with nutrient gelatine and poured out on to a glass plate or shallow dish. The germs distributed through the gela- tine are allowed to develop into colonies which can then be counted in the usual way. The mere enumeration of the bacteria in water is of far less importance than the determination of their nature and properties. The majority of forms found in rivers and springs are of an entirely innocent character ; they are bacteria whose natural habitat is water, and they per- form a useful task in consuming the dissolved organic impurities. But-when by any means pathogenic species obtain access to. such waters these may easily become a source of infection, particularly when, as is the case with cholera and typhoid organisms, the bacteria belong to species which can live and multiply side by side with the ordinary saprophytic forms (see Chaps. XIII and XIV)*. When the water to be analysed contains a very large number of bacteria it must be diluted, before mixing, with an equal quantity of sterilized water. For the detection of isolated pathogenic forms in comparatively pure water, that is to say in water containing very few bacteria of any sort whatever, a method of ‘nursing’ or ‘enrichment’ is employed. A sterile nutritive solution (peptone-sugar) is added to the water, so that the few germs present may multiply before the gelatine is added. This method involves ofcourse the drawback that the non-pathogenic species multiply also, and the danger that they may outnumber and overpower the less abundant bacteria we are looking for. Numerous aquatic bacteria are able to resist freezing for long periods, and ice sometimes contains enormous quantities of them (e. g. 2,000 per c.c.). [Even glacier ice is not free from them.] Of all the natural habitats of bacteria there is none in which they are * For marine bacteria, see Chap. VII. CLASSIFICATION ACCORDING TO NUTRITION 47 found constantly in such numbers as in the soil. They occur both as spores and in active vegetation (e.g. nitrifying bacteria). In the soil, as in water, the presence of organic matter is favourable to their increase, and they are most numerous in cultivated earth. Garden mould seldom contains less than . 100,000 germs per c.c., among them being almost always some pathogenic forms such as the bacilli of tetanus and malignant cedema. Putrefactive and pigment bacteria are also generally present as well as fermentative and nitrifying organisms. For the ordinary purposes of hygiene the culti- vation upon nutrient media of the bacteria of earth, water, and the atmo- sphere, and the detection and determination of pathogenic species, are sufficient ; the latter task being, however, by no means easy. Still more difficult and tedious is the systematic investigation of all the species present, necessitating as it does the employment of a number of different culture media varying in composition according to the nature of the species to be cultivated. It is not possible, for instance, to isolate the nitrogen-fixing bacteria of the soil upon a gelatine suitable for the tetanus parasite. In each case the character of the culture media must correspond to the require- ments of the organism to be cultivated. / ~~ Tt has been customary to divide the bacteria, according to their mode of life, into two great physiological classes, the Saprophytes and the Parasites. Both groups are dependent upon other organisms for their sustenance ; both are unable either to build up their protoplasm from inorganic bodies, or to obtain, from the decomposition of such, the energy necessary for their vital processes. Those bacteria which can live and grow only within the tissues of living organisms are called parasites, those which are satisfied with the secretions or excretions of living, or the substance of dead, organisms, are called saprophytes. But this classification no longer corresponds to facts. Being a corollary of two axioms of general physiology, it could be held good only so long as their validity was unimpaired. The first of these axioms was, that of all organisms the green chlorophyll-bearing plants alone* are able, with the aid of sunlight, to assimilate the carbon dioxide of the atmosphere, and from it to build up carbohydrates. All other living things, that is to say, plants devoid of chlorophyll, bacteria, and all forms of animal life, were supposed to be dependent, for their carbon, indirectly or directly, upon the carbon compounds already formed by green plants. The integrity of this principle has now been destroyed by the discovery of certain bacteria in the of the atmosphere. The second postulate was that no organisms of any kind could fix and utilize the free nitrogen of the air. All organic nitrogen was thought to be derived from the nitrates of the soil; green plants being * The red and the brown seaweeds also. 48 DISTRIBUTION AND ORIGIN again the only forms of life able to take it up in this state, other organisms receiving it from them at second hand in the shape of highly complex nitrogenous bodies. But this theory too has had to be abandoned since bacteria have been found, semi-parasitic in the tissues of plants, that can assimilate and store up free nitrogen (see Chap. X), The two groups of bacteria which necessitate a qualification of these two fundamental principles are, in a sense, complementary to one another; on the one hand, the earth bacteria which get their nitrogen from soluble nitrates, and their carbon dioxide from the air; on the other, the bacteria living on certain Legumi- nosae which derive their carbon dioxide from the tissues of the plant, and their nitrogen from the air. These facts force us to recognize the existence among bacteria of a special group of forms characterized by an extremely primitive metabolism, a physiological humility which shows them to occupy the very lowest rung of the ladder of life *. Such organisms as these cannot possibly be called saprophytes, and placed side by side with organisms which, like the putrefactive bacteria, have complicated physiological requirements. A better classification would be to divide the bacteria, according to their mode of life, into three biological groups, prototrophic, metatrophic, and paratrophic (24). Prototrophic species are those which either. require no organic compounds at_all for their nutrition (nitrifying bacterium), or which, given the smallest quantity of organic carbon, can derive all their nitrogen from the atmosphere (bacteria of root-nodules). With them may be classed those forms that are able, with a minimal supply of organic matter, to break up specific inorganic bodies and derive energy from the process (sulphur and iron bacteria). In no case are the chemical changes involved clearly understood, and there apparently exist forms exhibiting gradations between the purely proto- trophic and the metatrophic habit. The metatrophic bacteria, under which heading most known species must be placed, cannot live unless they have organic substances at their disposal, both nitrogenous and carbonaceous. They flourish in every place where these are accessible, in impure water, on foodstuffs of all kinds, and in all the cavities of the body which are in communication with the exterior and offer nourishment in the form of secretions or particles of food; the mouth, for instance, and nose, the alimentary canal, and the vagina. Many of the metatrophic bacteria bring about profound changes in the chemical composition of the media in which they grow: fermentation (zymogenic bacteria), or putrefaction (saprogenic bacteria). Others break up the sub- stratum in a less conspicuous manner, but develop particularly in media * Tt seems more than probable that further investigation will result in the discovery of other low organisms (protozoa) with similar functions. CLASSIFICATION ACCORDING TO NUTRITION 49 which have already been decomposed by saprogenic species, and contain a mixture of organic compounds which serve as nutriment. Such bacteria may be termed saprophile. : In the case of some metatrophic species the chemical change effected by their growth varies according to the nature of the medium they grow in (polytrophism), while the action of others is restricted to some one specific process (monotrophism, see Chap. III). The ability to grow in the living tissues is possessed in various degrees by different species, they are faculta- tive parasites (cholera, anthrax, and perhaps typhoid bacilli), but many are totally unable to exist under such conditions (obligatory saprophytes, obligatory metatrophic bacteria). . Finally, the paratrophic group includes all those bacteria that can exist only within the living tissues of other organisms. Paratrophic bacteria occur either not at all outside the animal body (gonococci), or else only as dust-borne spores or resting cells (tubercle, diphtheria). Their culture is possible only under conditions closely resembling those of the living tissues (on serum at blood-heat, for instance), and where there is freedom from competition with rapidly growing metatrophic species. Some paratrophic bacteria seem to flourish well even outside the animal body, if their growth - on culture media is any criterion, but the conditions here are so very special that no conclusions can be drawn therefrom as to their behaviour in nature. Using then the modes .of nutrition as a basis for classification, we ‘distinguish the following groups :— I. PROTOTROPHIC BACTERIA. Nitrifying bacteria, bacteria of root-nodules, sulphur and iron bacteria ; occur only in the open in nature, never parasitic, always monotrophic. II. METATROPHIC BACTERIA. Zymogenic, saprogenic and saprophile bacteria; occur in the open and upon the external and internal surfaces of the body, sometimes parasitic (facultative parasites), monotrophic or polytrophic. III. PARATROPHIC BACTERIA. Occur only in the tissues and vessels of living organisms, true (obligatory) parasites. ’ It is worthy of remark that not only the bacteria but all other organisms can be arranged in these three biological divisions. All green plants from the simplest unicellular alga up to the largest forest trees are prototrophic; all fungi and animals are metatrophic, except parasitic forms, which are paratrophic. _ Seeing that the spores of metatrophic bacteria are ubiquitous, it is not ‘surprising that all liquids offering suitable conditions of nourishment should, if left uncovered and exposed to the air, soon become turbid from the FISCHER E 50 DISTRIBUTION AND ORIGIN development of bacteria. But although it seems to us nowadays self: evident and unavoidable that such turbidity must owe its origin to the development of the ubiquitous and invisible germs—omune vivum ex ovo— this occurrence was, until not so very many years ago, a profound mystery. It appeared absolutely certain that these living ‘animalcula’ must have arisen spontaneously from the non-living constituents of the liquid. ‘ Spon- taneous Generation’ (generatio aeguivoca) seemed, on apparently good evidence, an indisputable fact. The question as to the origin of life—an older problem even than that of evolution—is the natural outcome of the Kant-Laplace theory of the origin of the earth, according to which our planet was at first a molten mass that had to cool down before living things could exist upon its surface. Whence came these first forms of life? Were they precipitated from other planets through space upon our globe, or did they arise de xovo from the non-living substances that then alone existed? The first hypothesis has little to support it, and would only throw the question one step further back. It seems much more probable that the first organisms did really arise from inorganic matter by ‘spontaneous generation,’ and that, as the evolutionary theory assumes, all other living things have been gradually evolved from them in continued series. The doctrine of evolution is, indeed, incomplete without the assumption of such a commencement. Its possibility once granted, there is no @ priord reason to deny that it stil] takes place, and that side by side with the ceaseless evolution of new species there may actually arise new organisms by spontaneous generation. Since we can imagine only the very simplest forms of life to be produced in this manner, it is natural that evidence for their occurrence should have been sought among bacteria and other fermentative organisms. Experiment showed that in some cases boiling for many hours did not prevent the development of bacteria in nutrient solutions, and since it was contrary to all experience that any living things could have survived such temperatures spontaneous generation seemed to be beyond dispute. When, as frequently happened, such organic infusions remained sterile after boiling, the advo- cates of the theory explained matters by saying that conditions had been changed, and the fluid was ‘no longer suitable’ for the genesis of life. They also showed that passing air through it apparently removed these unsuitable conditions, bacteria appearing again. If, however, the air had been raised to a high temperature first, or passed through sulphuric acid, or even through cotton-wool, the sterility of the liquids sometimes remained unimpaired, but not always. Contradictory results abounded and difficulties arose both for partisans and opponents of the theory. It was long before the controversy could be regarded as satisfactorily settled, but settled it was at last, and we know now that at the present day a spontaneous generation of organisms does not take place in this way. We know that SPONTANEOUS GENERATION 51 in all those cases where bacteria appeared in liquids after protracted boiling they arose from highly resistant spores, whose vitality the heat had been unable to diminish, and we know further that those experimenters were right who sought to render air sterile by passing it over sulphuric acid or through heated tubes, and that it was for this reason that the infusions sometimes remained clear. Infusions of organic substances, if they be only boiled long enough, will remain sterile for years, even in vessels closed only by a plug of cotton wadding. A spontaneous generation of new life never takes place; for bacteria, like all other organisms, can only originate from pre-existing germs. The fantastic theories that spring up from time to time regarding the derivation of bacteria from the disintegrated protoplasm of the higher creatures are apocryphal and, like the stories of organisms that consist only of carbon, oxygen, and hydrogen, must be received with the scepticism they deserve (26). Bacteriological research has thrown light from another side also upon the irrepressible theory of spontaneous generation. Before the discovery of prototrophic micro-organisms it was inconceivable how the first forms of life to appear upon the earth could have obtained their nourishment, for all organisms, including the infusoria and other protozoa, seemed to be metatrophic. Now, however, that we are acquainted with the meta- bolism of the prototrophic bacteria, particularly the nitrifying bacteria, we can form some conception of the mode of nutrition of the earliest terrestrial organisms, CHAPTER VI PHYSIOLOGY OF NUTRITION AND GENERAL PRINCIPLES OF CULTURE Chemical Composition of Bacteria (27). THE substance of bacteria, like that of all other living organisms, consists for the main part of water, which constitutes about 85 per cent. of their weight (aman body 65-70 per cent., green plants 60-80 per cent., algae about go percent.). The high proportion of water (shown also in the abun- dance of sap-vacuoles) is due to the fact that they are aquatic, not terrestrial organisms, inhabitants of liquid media. Analysis of the substance of pure cultures freed as far as possible from the culture medium has given the following results :— (NENCKI) (KaPPEs) Putrefactive bacteria (a Bacillus mixture of several species). prodigiosus. Water . . . ° Fi ‘ 83-42 < 7 85-45: Protein substances . . . «. 1396 . « 10-33 Fat. . ‘ . - F . 1-00 3 3 70 Ash . : : 6 é i é +78 “ - 1-75 Residue (not analysed) . . . 84 8. . 1:57 These two analyses give, of course, only a general idea of the composition of the bacterial cell. Other cases would probably show greater differences, for bacteria are, like all other organisms, dependent in their composition on the nature of the food-stuffs' available. Like these also they are no doubt capable of selecting their food to a certain degree. The quantity of the ash will be larger where the surrounding medium is rich in salts, and there will be a higher percentage of proteids in bacteria from a nutritious peptone culture than in those nourished on glycerine and ammonium chloride. Still, on the whole, their composition is evidently not widely different from that of other organisms, as the above analyses show. CHEMICAL COMPOSITION OF THE CELL 53 Nencki (27) isolated the proteid constituents of the bacterial cell by pre- cipitation with boiling hydrochloric acid, removal of fats with ether and alcohol, solution in caustic potash and final precipitation with chloride of sodium. The substance thus obtained (mycoprotein) agrees pretty closely in composition with one prepared by Schlossberger from yeast, and contains 52°39 per cent. carbon, 7°55 per cent. hydrogen, 14-75 per cent. nitrogen, and about 25 per cent. oxygen. Even if we assume that this body (free from sulphur and phosphorus) is an unaltered constituent of the bacterial cell and not a decomposition product from more complex proteins, it is not necessarily the essential constituent of the protoplasm. If it were we should have to place the bacteria chemically as well as morphologically below all other organisms, where, as far as we know, the phenomena of life are inseparably bound up with the presence of highly complex bodies like nuclein and nucleo-albumen rich in phosphorus. Since, how- ever, such compounds do undoubtedly occur in some bacteria, further investigations are necessary before we can form an opinion as to the nature and importance of mycoprotein. Closely related to the proteid bodies (using the word in its widest sense) are those poisonous substances known as toxalbumines. The constitution of their molecule is, however, as yet quite unknown *. Carbohydrates are probably present in all bacteria, but they certainly do not play such an important part as in the cells of higher plants, for, as already mentioned, the cell-membrane of bacteria consists not of cellulose but of a proteid substance. Apart from the not very clear indications afforded by the ‘granulose reaction’ in some few species (p. 13) there are no instances of differentiated carbohydrate cell-contents. The gelatinous substance produced by Leuconostoc (see p. 10) and by some of the mucilaginous species that occur in wine and beer is probably a carbohydrate (dextrane, [C,H,,O,],) similar to cellulose and the slimy secretions of some gelatinous algae. As special temporary cell constituents must be regarded also those products of fermentation which, although formed in the cell, are not stored up but excreted as metabolic products (see Chaps. XI-XIV). The percentage of ash given in the various analyses of bacteria cannot be taken as indicating in any degree the value of salts in the economy of the cell, because the nutritive media were not prepared with this end in view. Food Stuffs of Bacteria (28). Mineral substances are as necessary for the Bacteria as for all other organisms, albeit in a much smaller quantity. One milligram of living bacteria (i.e. about thirty milliards of individuals) with 1 per cent. of ash * For the relations of the toxalbumines to infectious diseases, see Chap. XVII. 54 PHYSIOLOGY OF NUTRITION would contain only ;3, milligram of mineral salts, so that it is evident that ‘very minute quantities of such salts are sufficient for nutritive media, say from o-I to 0-2 per cent. Of the elements may be mentioned as indispensable: sulphur, phos- phorus, calcium, magnesium, potassium, and sodium, with traces of chlorine and iron. Whether other alkalies such as rubidium or caesium can be substituted for potassium and sodium, or other alkaline earths, such as barium or strontium, for calcium, is doubtful. Recent experiments on the metabolism of mould-fungi render it improbable. Full details as to the most suitable proportions of mineral salts in nutri- tive media will be found in practical treatises. In the following brief account. of the nutrition of bacteria, the words ‘necessary salts’ will be understood to mean o-r per cent. K, HPO,, 0-02 per cent. Mg SO,, and o-o! per cent. CaCl, Sodium and iron are also necessary, but are always present in traces in the other chemicals used unless these have been specially purified ; they are likewise present in tap-water. For pathogenic forms the addition of from o-1 per cent. to o-7 per cent. NaCl is advisable ; but if the media have been prepared with infusion or extract of meat it is not necessary. These few mineral substances will be found sufficient probably for all bacteria, be they prototrophic, metatrophic, or paratrophic. The require- ments in carbon and nitrogen compounds, on the other hand, are widely different for each group. The prototrophic nitrifying bacteria grow well in a fluid of the following composition :— Water, H,O 2 F . a . F 100- Potassium Nitrite, KNO,_ : : 05 Potassium Hydrogen Phosphate, K,HPO, F +02 Magnesium Sulphate, MgSO, . - . 3 03 Sodium Carbonate, Na,CO, . ‘i ‘i : 05 Sodium Chloride, NaCl .. ms 4 . 05 The nitrous acid supplies the nitrogen, and the carbon is derived, not from the Na,CO,, but from the carbonic acid of the atmosphere. Other proto- trophic soil bacteria are able to fix atmospheric nitrogen, but require some organic compound as a source of carbon; sugar for instance. The growth of various metatrophic bacteria upon solutions of different carbon and nitrogen compounds is illustrated by the following table. All the solutions contained the same amounts of mineral substances, and, with the exception of three cases, had an alkaline reaction; free acid, as the figures show, generally retarding development. The cultures were kept at the most suitable temperature in each case and were watched for fourteen days, so that delayed growth might not be overlooked. The symbols employed have the following meanings :— FOOD STUFFS 55 +++ = very luxuriant growth, liquid turbid with bacteria or a pellicle upon the surface (cholera, B, szb¢z/is), or deposit of bacteria at bottom of vessel (anthrax). ++ = growth moderate, faint but distinct turbidity or a delicate pellicle. + = feeble growth, liquid opalescent or turbidity visible only on shaking. ++? = scarcely any growth. O = no growth. Source of Source of ~ | Reac- | B. An- B. B. coli vibr. B. B. pyo- Nitrogen. Carbon. tion. | thracis. | typhi. » CO". | cholerae.| subtilis. | cyaneus. 1| 1% Peptone {1% Grape sugar] alk. |++-+|+-++|+++|+++|+++ [+++ 2) ,, Peptone » Peptone alk. | ++ | +4+ | ++ |] ++ + |4+4++ 8| ,, Asparagine | ,, Grapesugar| alk. ce) + J+4+4+/4+4+4+/++4+/+4++ 4| ,, Asparagine} ,, Grapesugar| acid fo) +? |4+4+4+/] 0 ++ |+4¢+ 5| ,, Asparagine | ,, Asparagine | alk. fe) fe) ++) ++ + + 6| ,, Asparagine | ,, Asparagine | acid oO fe) + ° + + 7! ,, Ammonium] ,, Glycerine | alk. fe) fe) ++ + {+++ |) +++ tartrate i 8| ,, Ammonium| ,, Ammonium] alk. ie) ie] +? fe) fo) +? tartrate tartrate 9| ,, Ammonium| ,, Glycerine alk. (e) o }+4+4+) ++] ++ | ++ chloride 10) ,, Ammonium| ,, Glycerine | acid ° Oo j++4)] 0 ++ + chloride 11] ,, Potassium » Grapesugar| alk. oO ° + +? |} +4+ |+4++ nitrate 12| ,, Potassium | ,, Glycerine alk. fe) fo) fe) (e) Oo {+++ nitrate 13 none oy Sugar alk, (o) fe) fe) O° fe) Oo? 14| ,, Potassium none alk. O° fe) ° ° oO ce) nitrate. .The most conspicuous result that the table shows is the great difference between B. anthracis and B. pyocyaneus. The former prospers only where peptone is available as a source of nitrogen (1 and 2), the latter grows just as well and exhibits its magnificent fluorescence upon nitre (12). In other words B. anthracis is a ‘peptone bacterium, B. pyocyaneus a ‘nitrate bac- terium’ approaching the members of the prototrophic group in its physio- logy. The latter, however, needs a special source of carbon, not being able to assimilate the carbon dioxide of the air (14). There is another numerous group of metatrophic forms which, given carbon in a suitable form, can utilise the nitrogen of ammonia compounds, and thrive as well as they do upon peptone. B. coli is one of these ‘ammonia bacteria; and also V. cholerae and B. subtilis. Others, B. typhi for instance, are ‘ amido- bacteria’; they cannot assimilate the nitrogen of ammonia, but grow fairly well upon amide bodies, such as asparagine and leucine. One fact must not be lost sight of if the bacteria are classified in this way, according to 56 PHYSIOLOGY OF NUTRITION their nitrogen requirements: the power of utilising the nitrogen in different compounds is largely dependent upon the form in which the carbon is supplied. Thus, the ammonia bacteria can utilize the nitrogen of saltpetre if sugar is present, but they are unable to do so if the carbon is presented to them in the form of glycerine. No bacteria can dispense with nitrogen entirely, and the feeble growth of B. pyocyaneus in sugar solution alone (13) was probably due to the presence of impurities, or to the absorption of ammonia from the air of the laboratory. The first attempts to characterise bacteria according to their behaviour towards different nitrogen compounds were made by Nageli, who also examined yeasts and mould fungi in the same way. The subject has been still more recently studied by Beyerinck (28). In medical bacteriology, fluid culture-media are now very rarely ~ employed, having been driven out by the stereotyped recipes for peptonised gelatine and agar. That this has been disadvantageous there can be no doubt. The case of 2. typhi and B. coli, the one an amido-bacterium, the other an ammonia bacterium, shows the value of fluid media of varying composition for the differentiation of species. Not less important are the conclusions which may be drawn from such investigations as to the occurrence of pathogenic bacteria in nature. This subject will be more fully discussed in later chapters. The form in which nitrogen is offered affects greatly the influence which the reaction of the culture medium has upon the growth of the bacteria. The more assimilable the nitrogen compounds, the less sensitive are the bacteria to the deleterious effect of free acid. 2B. pyocyaneus, as the table shows, is, when it gets its nitrogen in the form of asparagine (5-6), unaffected by the acidity of the medium which palpably retards growth when ammonium chloride is the only source of nitrogen. The extremely sensitive V. cholerae is totally overpowered by free acids (4 and 6), while B. sudtilis, which grows well on weakly acid hay-infusion, is less marked in its behaviour, and B. colz seems to be quite uninfluenced by the reaction. The formation of pigment too, in B. pyocyaneus, as in other chromogenic bacteria, is largely dependent upon the reaction of the medium and the nature of the nitrogenous bodies it contains. The organic compounds of nitrogen, although they all of them contain carbon also, are not in themselves, sufficient for vigorous growth, as a comparison of Nos. 1, 2, 3 and 5 of the table shows, The carbon of ammonium tartrate (8), for instance, is absolutely useless to B. subtilis, and even B. coli and B. pyocyaneus are half starved when they have no other carbon-containing compound to draw upon. The value of a special source of carbon, so clearly shown in the table, is twofold: the excess of organic carbon is used in the building up of proteids; and, more important still, the breaking down and oxidation of FOOD STUFFS 57 the carbon compound provides the necessary energy for the full utilisation of inferior nitrogenous substances (11 and 12). The organic carbon compounds are of very different degrees of import- ance as food-stuffs, their value depending mainly but not exclusively upon their heat of combustion. Grape sugar and sugars in general are the best, then glycerine and other polyacid alcohols, such as mannite and dulcite, and finally compounds like tartaric and succinic acid, benzoic acid, and the monacid alcohols and their derivatives such as fatty acids and amines *. Compounds, in which an oxygen atom is linked by two valencies to the carbon atom, as in urea CO(NH,),, or oxalic acid (COOH),, are useless as sources of carbon, as are also the cyanogen comtpounds. It would appear, therefore, that the carbon is in its most utilisable condition when it is linked_ with hydrogen in the form Ce being less valuable as CH, still less so as CHOH, and not at all in the CO or CN radicles. Exceptions to this rule, however, must not be forgotten. Speaking generally, the best data for the discrimination of a bacterial species from the standpoint of nutritional physiology are those afforded by its behaviour towards nitrogenous compounds, the demands made for carbon being less narrow and well defined. The paratrophic bacteria are, as our table shows, able to grow only in those solutions that contain peptone. They approach in this respect most closely to the metatrophic forms, but their requirements are often much more special. The gonococcus, for instance, grows only upon albuminous media, such as coagulated blood serum. Upon this too the diphtheria bacillus thrives best. The tubercle bacillus, which we are obliged for the present to regard as a Strictly parasitic species, is able to grow upon inferior substrata, even on those of the ammonia bacteria (see Chap. XVI). For the culture of bacteria there are commonly used, besides bouillon and other fluids, the so-called solid media prepared with gelatine or agar. The commonest recipe is an infusion of meat (1 lb. meat to 1 litre water), with about 1-2 per cent. peptone and sugar, to which Io per cent. gelatine or 1-2 per cent. agar is added, the whole being boiled and filtered hot. This gives a clear gelatinous mass, in which the nutritive substances are equally distributed throughout the non-nutrient gelatine or agar. The introduction of such culture media (29) has been an important factor in the rise of bacteriological science, for it is only by the use of easily melted and easily congealed substrata that we are able to isolate bacteria without difficulty, and obtain them in pure cultures, The nutritive fluids mentioned in the table on p. 55 may of course be mixed with gelatine or agar, and the advantages of several methods united. * For details, a re-examination of which is desirable, see Nageli ; appendix No. 28. 58 PHYSIOLOGY OF NUTRITION If it is desirable to exclude all organic compounds, colloid silica’ may be used as a matrix instead of gelatine. Great latitude is permissible in the composition of the peptone-sugar-meat solutions that are used. Almost every laboratory has its own special recipes, dictated either by whim or by the results of long experience. In many cases the media are unnecessarily overloaded with nutriment. Besides meat, hay, straw, plums, potatoes and many other substances may be used to make nutrient infusions. The wort of beer is often used, and, as an opaque solid culture-medium, potatoes are often employed. For practical details the technical handbooks must be consulted. Apart from characters such as pigmentation or the production of gas, the modes of growth of different bacteria on the same substratum are sufficiently varied to be of some use in the differentiation of species. Too much importance, however, must not be attached to these features. In fluid media, two chief types of growth are seen. In the one the liquid remains clear, in the other it becomes turbid. When the fluid remains clear we know that we have to do with non-motile bacteria with a tendency to filamentous growth. They collect on the walls and bottom of the tube in flocculent masses, which may be dislodged by shaking (Anthrax, Strepto- coccus). When such non-motile forms need much oxygen (B. tuberculosis for instance), they form a thick membrane, sometimes smooth, sometimes wrinkled, over the surface of the clear liquid. All isolated, non-filamentous forms, particularly the motile species (Cholera, Typhoid), cause the medium to become uniformly turbid. The turbidity varies from a dense milky opacity to a faint opalescence only visible on shaking. Strongly aerobic species form a pellicle on the surface of the fluid (V. cholerae, B. subtilis). By culture upon gelatine we are able to divide the bacteria into two groups, those which, by means of a peptonising enzyme, liquefy the gelatine and those which do not. The great majority of known forms belong to the former class; B. typhi, B. coli, Streptococcus, Lactic bacilli, &c., are examples of the latter. Further differences of growth on gelatine are brought out by the methods of ‘plate’ and ‘stab’ culture. In plate culture the melted gelatine is inoculated with a minute quantity of bacteria, or of substances containing bacteria, and then poured out in a thin layer upon glass. There it coagulates, and the germs it contains multiply. The germs being fixed produce around themselves sharply-defined colonies, each colony having arisen from a single germ or from a few stuck together. The young colonies in particular show many characteristic features; colour, form, and contour, consistence and lustre, and the structure as seen under a low- power lens are all useful points. A detailed account will be found in Lehmann and Neumann’s atlas (80), and is needless here. The following description of the colonies of two well-known bacteria will show the nature of the differences involved better than an enumeration of all the known MODES OF CULTURE 59 varieties of growth. The two species selected are the cholera and the anthrax bacteria. The anthrax colonies liquefy the gelatine slowly ; they are whitish and round ; under a low power the edge of the colony appears filamentous, in ‘tresses’ and loops, not smooth; in older colonies an irregular skein or clump lies in the fluid, almost transparent, gelatine. The cholera colonies liquefy the gelatine rapidly ; they are yellowish white, and magnified show a granular texture and an undulating, not filamentous, edge; the liquefied gelatine immediately round the disintegrating granular clumps is turbid. It must not be forgotten that many variations occur, and that closely similar forms, such as the cholera vibrio and the aquatic vibrios or typhoid bacilli and B. colz, are not distinguishable by their colonies alone. The gelatine stab-culture is made by thrusting vertically into a tube of coagulated gelatine a platinum wire charged with the substance of a pure culture. Species which need oxygen grow only in the upper parts of the gelatine, anaerobic forms only in the deeper parts. Growth in filaments or chains shows itself by delicate threads growing out into the surrounding gelatine so that the path of the needle appears feathery or moss-like, e.g. Anthrax. Bacteria whose cells are isolated are confined in their growth to the path of the needle: Among species which liquefy the gelatine great importance is laid upon the shape of the liquefied tract. This may be equal all along the path of the needle, and have the appear- ance of a straight liquid tube in the middle of the solid gelatine, or, if liquefaction is more rapid towards the surface, a funnel-shaped well is produced. Here again considerable variations take place, and closely allied species are not distinguishable by these data alone. The surface of agar or gelatine that has been allowed to solidify in tubes in a slanting position is used for ‘streak’ cultures. These are made simply by smearing the surface of the substratum with a platinum wire charged with bacteria. The differences in colour, contour, lustre, and con- sistence are similar to those of the colonies in plate cultures. Agar is not liquefied by any bacteria. The modes of nutrition of particular biological groups among bacteria will be considered in the subsequent chapters. CHAPTER VII RESPIRATION OF BACTERIA Aerobiosis and Anacrobiosis; Light-producing Bacteria; Marine Bacteria; Sulphur and Iron Bacteria. THE old and now obsolete term ‘vital air’ applied to oxygen meant that without it life was impossible. Of all the axioms of physiology, none has ever seemed to be so unassailable as that which asserted the necessity of oxygen to every living thing. It appeared to be a law absolutely without exception that all animals and all plants must ‘breathe, that is to say, must take up free oxygen in order to oxidise and break up the organic compounds of their food or of their tissues, and thus obtain the energy necessary for the processes of life. Deprivation of air seemed inevitably followed by cessation of life. Here again the study of yeasts and fermentative bacteria has overturned the old views and revolutionized our ideas regarding the chemistry of life. In 1861 Pasteur (31) discovered that many zymogenic bacteria could live and even set up active fermentation in the absence of oxygen; and he gave them for this reason the name of anaerobes. His statements, romantic and improbable as they at first appeared, were soon corroborated, and the general recognition of their accuracy has resulted in the division of the. bacteria into two groups, the aerobes and the anaerobes. In the aerobic bacteria the process of respiration is the same as in all ordinary organisms, They absorb oxygen, and with it break up non-nitrogenous bodies such as glycerine or sugar into carbonic acid and water. They are also able, like plants and animals, to assimilate nitrogenous substances such as peptones and amido compounds, although with less gain of energy and less easily than they can carbonaceous bodies. Many of the aerobic bacteria are totally unable to live without oxygen, and when deprived of it die as would a mouse in pure hydrogen. They are exclusive or obligatory aerobes. In rarefied air or in artificial mixtures of gases their vitality is proportional to the amount of oxygen present. Under an air-pump, for instance, they AEROBIOSIS AND ANAEROBIOSIS 61 ceas2 to grow long before a vacuum is reached (acetic bacteria, B. subtilis). Contrasted with the obligatory aerobic bacteria, we have the obligatory anaerobic forms which thrive only in the absence of oxygen, small traces of this gas being sufficient to inhibit growth (B. ¢e¢anz, some butyric bacteria, bacillus of malignant oedema). Between these extremes there is a great host of bacteria representing every gradation between the two modes of life. These are the facultative anaerobes, which, while growing best with a plentiful supply of oxygen, are nevertheless able to exist with a very small amount, and even with none at all, although in this case their vitality is often much impaired. Anaerobic bacteria, both obligatory and facultative, are found everywhere in nature where the air cannot penetrate, or where it is replaced by other gases—in the deeper layers of the soil, for instance, in the mud of rivers and standing waters, or the ooze of the sea bottom, and in manure. In all such places anaerobic bacteria are the principal and often the only forms of life, and by the fermentative and putrefactive processes they set up they effect the disintegration and removal Of dead animals and plants.* As be- longing to the group of facultative anaerobic bacteria may be mentioned the lactic acid ferment, the bacteria of typhoid and cholera, many staphylococci and streptococci and most putrefactive bacteria. The power of anaerobic growth varies, even in the same species, according to the source whence the germs were derived and the mode of culture. Deprivation of oxygen affects the bacteria in many ways. Some of the pigment bacteria (B. vio- laceus, for instance) give rise to colourless cultures if oxygen be excluded ; others, like Spirdllum rubrum, form pigment most plentifully under these conditions, though here again, as in so many other cases, exceptions occur. Many obligatory anaerobic bacteria (e.g. some of the butyric ferments) are motile, the energy necessary for movement being derived from the partial breaking-down of the molecules of the fermentable substances on which they grow. Access of oxygen stops the motion at once, just revers- ing the conditions found among the aerobic forms, where the cilia work the more vigorously the more oxygen is present, and become paralyzed at once if it be cut off. These movements, minute as they are, represent an expenditure of energy that is considerable when the size of the organisms is taken into account. Those aerobic bacteria which possess the power of movement are attracted by oxygen. If a drop of water containing them be placed upon a slide and covered with a thin glass slip, they crowd to the edges of the preparation and around air-bubbles in the water. This property of being attracted by oxygen has been utilised by Engelmann (82) for the detec- tion of minute traces of free oxygen. His ingenious method, which * The chemical aspects of the phenomena of putrefaction as well as the theoretical explanation of anaerobiosis are discussed in Chap. XIV. 62 RESPIRATION OF BACTERIA employs aerobic bacteria as living reagents, has given us what has hitherto been unattainable, a micro-chemical test for the gas. It is a well-known fact that there is in green plants, going on side by side with the ordinary respiration of the cells, a second process of gaseous exchange accompany- ing the assimilation of carbon dioxide and also often incorrectly called ‘respiration.’ The carbon dioxide is split up in the green parts of the plant by the energy of the sunlight, the carbon being retained, and the oxygen thrown off into the atmosphere. Now it is not all rays that are equally powerful to cause this chemical change. The absorption spectrum of chlorophyll shows that the red rays between Frauenhofer’s lines B and C are the most strongly absorbed by green plants, and after them that part of the spectrum just beyond F. It is just these regions that are most active in causing the evolution of oxygen, and Engelmann demonstrates this inthe following way. By means ob ¢ 2 45 i of an arrangement of prisms in the substage of a microscope he pro- jects a spectrum upon green algal filaments or moss-leaves lying in the field of view, the water in which = they are mounted containing aerobic i ll bacteria. If, now, the illumination be strong, and all extraneous light be carefully excluded, it can be seen that the aerobic bacteria crowd Fic. 16, Detection of oxygen by means of bacteria. sound the filaments just where the The vertical lines are the Frauenhofer lines of a spectrum : thrown on the field of the microscope. In the spectrum active rays fall, the chief swarm a lies a filament of the alga Cladophora, and around it, at B, C, and F, the bacteria swarm (see text). Magn. 200. lying between B and C, and an- other smaller one near F (Fig. 16). Around these parts of the alga only a few scattered organisms occur, show- ing that the evolution of oxygen is at a minimum. The application of this bacterial method for the detection of minute traces of free oxygen is an operation of great delicacy, and the results which it gives must be interpreted with great care because the movements of bacteria are very often rendered more active by other substances beside oxygen, particularly by food-stuffs, as will be explained in the section on chemotaxis. The attraction by oxygen is in fact only a special instance of chemotaxis. The great amount of energy derived from the combustion of food-stuffs, and from the oxidation of the tissues in higher organisms, is not all expended in the form of mechanical work, but applied in part to raising the tempera- ture of the tissues. In animals this is conspicuous in the case of ‘ warm- blooded’ creatures, and in plants we have instances in the germinating grains of cereals and in the flowers of the Aroideae, which are often sensibly warm to the touch. Fermenting and putrefying substances also (hay, manure, cotton- THERMOGENIC AND PHOSPHORESCENT BACTERIA 63 waste) frequently become heated, the temperature inside the mass being often raised to 60° or 70°C. This spontaneous heating, which may increase to actual ignition (spontaneous combustion), is due to the respiratory activity of aerobic bacteria (thermogenic bacteria of Cohn), which set up fermentation and putrefaction. Cohn (83) found in damp cotton-waste a micrococcus which, when well supplied with air, raised the temperature of the decaying mass to 67° C., if care were taken to prevent radiation, carbonic acid and trimethylamine arising as respiratory products. Light is another form in which the surplus energy of respiration exhibits itself both in terrestrial and marine plants and animals. The existence of phosphorescent insects is a matter of common knowledge. The mysterious light often seen in old willow-trees is given off by the mycelia of certain parasitic fungi. Among marine organisms there are very many kinds which are luminiferous. The phosphorescence of the sea is mainly due to light- producing infusoria, hydrozoa, and ascidia, and in our latitudes above all to bacteria (34). The various kinds of phosphorescent bacteria have been collected together to form a ‘ biological’ genus Photobacterium. They include actively motile straight rods and vibrio-like forms, but very few have been completely described, and names like B. phosphorescens, B. luminosus, Vibrio albensis must not be regarded as designating ‘good’ species. The faint glow seen upon decaying haddocks, mackerel, and other sea fishes, is pro- duced by these micro-organisms. Whether any phosphorescent bacteria occur in fresh water is doubtful: but all with which we are as yet well acquainted are from the sea. Being marine organisms, the phosphorescent bacteria need in their culture-media from two to three per cent. NaCl, besides the usual salts and peptone, and to obtain successful cultures of phosphorescent bacteria the media must contain these substances, besides some other source of carbon such as sugar, glycerine or asparagine. Phosphorescent bacteria would seem therefore to be ‘ peptone’ bacteria, saprophytic in the sea upon dead animals and plants, from which they are washed off in countless numbers by the waves. The phosphorescent bacteria of the North Sea and Baltic flourish best at about 18° C., but can grow quite well at much lower temperatures, even down to o° C., resembling in this respect the other inhabitants of northern waters. In the absence of oxygen they are indeed able to grow slowly, but are then not phosphorescent, the production of light being an exclusively aerobic pheno- menon. This is evident, too, when we watch the phosphorescence of the sea, for perfectly smooth water does not shine at all, while the brilliancy of the light is always greatest upon the crests of the waves, or where the water is churned up with air in the wake of a ship. That the respiratory exchange (oxidation) of the bacteria is the cause of the phenomenon is proved by the fact that the death of the micro-organisms or exclusion of 64 RESPIRATION OF BACTERIA oxygen quenches the light at once, whilst a more abundant supply of highly combustible food-stuffs like carbohydrates increases it. We know of no specific substance (/uciferinz) to which the luminosity could be due, and the phenomenon is of quite different nature from that exhibited by phos- phorescent bodies like calcium sulphide, for in the bacteria the production of light is quite independent of previous insolation. Phosphorescent bacteria may easily be obtained by placing the flesh of fresh haddocks or herrings in a solution of two to three per cent. of NaCl and keeping at a low temperature (5°-10°C.). In one or two days not merely the fish, but the whole of the liquid in which they lie, give off a pale-greenish light which becomes much more brilliant if a little sugar or glycerine (i. e. respirable material) be added. The bacteria may be readily isolated by the usual methods upon peptone-sugar-gelatine prepared with an infusion of fish and common salt. The pure cultures thus obtained are so strongly phosphorescent that by protracted exposure they may be photographed in their own light. The rays given off are only the more refrangible, from DtoG. This is evident, too, from the bluish colour of the light. A few words may be said here regarding other marine bacteria (85). The investigations of the German Plankton Expedition show that the prevailing forms are actively motile rods and vibrios, cocci being less numerous. Their distribution is determined mainly by the proximity of land, for the algal vegetation which is richest near the shore attracts myriads of marine organisms that provide the bacteria with a rich variety of nutriment. The influence of the shore extends four or five miles out to sea. The degree of illumination seems without influence, and no regularity could be observed in the distribution, but the number of bacteria per c.c. varies immensely, however far from land the sample be taken, as the following figures show: Plymouth Docks (ebb) . . ; - 7 : 13,320 per c.c. 1 mile from shore (flood) 5 : ‘ . < 3,960. +s 240 miles from shore (Gulf Stream) 3 : F 645 is 450 miles from shore (Sargasso Sea) : 20, 200, 206, 168 a These numbers include the spores of mould-fungi. In 54 per cent. of all samples about 100 germs per c.c. were found; at depths of from 800 to 1,100 metres below the surface only from eight to twelve bacteria were present. Specimens of ooze from the ocean bed at depths varying from 1,523 to 2,406 metres were sterile; others again from 4,099 to 5,250 metres contained from one to four bacteria per c.c. This paucity is the more remarkable when we consider that the temperature was from 2° to 5° C., and the conditions altogether such that foraminifera and radiolaria occurred abun- dantly. Possibly the culture-medium (peptonized fish-broth gelatine) was SULPHUR BACTERIA 65 at fault, since it affords nourishment only to metatrophic forms, not to prototrophic, and it is just these latter that we might expect to find on the ocean floor. It is not at all unlikely that there are species characterized by an extremely simple type of metabolism, which would throw new light upon the mysteries of marine life. Russel has discovered aerobic bacteria that reduce nitrates in samples of mud from the sea-bottom. In the aerobic bacteria which we have been considering, respiration consists essentially in the oxidation of complex organic substances, the energy thus set free being necessary for the processes of life. In the case of the anaerobes the energy developed, although smaller in amount, is likewise derived from the splitting-up of fermentable and putrescible organic substances. Both classes, aerobes and anaerobes, are metatrophic in this respect. There is, however, in certain prototrophic bacteria a process going on comparable to respiration, but consisting in the oxidation of izorganic compounds. The micro-organisms in question are the nitre bacteria (see p. 105) and the remarkable sulphur bacteria, the classical examples of prototrophic re- spiration. The sulphur bacteria (36), Thiobacteria (p. 13), whose cells are often crammed full of ‘spherical refringent masses of pure sulphur, occur in nature in places where free sulphury gil 17.,.Sclphur Bacteria, sre, Beggiatog al of sul etted hydrogen is present, s2u%e waters ¢ almost te from sulphur after another day or Such are sulphur springs where Dectesim; s, piece of a mesh like sooglosa of Lamprsietis the SH, is principally of mineral ®*84"% 4 ¢ fom Zopf- origin, and the mud of standing waters and of the sea-bottom, where it is set free by the putrefaction of dead plants and animals *. The bacteria were formerly thought to produce the SH,, and therefore to play an important part in the origination of sulphur springs, but the splendid researches of Winogradsky have shown that the micro-organisms need the gas as a food-stuff, and are unable to live without it. Thiobacteria can be found at any time of the year, but are most abundant in the early spring and late autumn, periods when the remains of the summer's vegetation in’standing waters are plentiful, and when the putrefactive processes set up by other bacteria cause an evolution of SH,. The sulphur bacteria frequently form a snow-white furry coat on the rotting vegetation, with here and there pink or pale puce-coloured patches. SR oo) Taye aeK pean * The ‘dead-ground’ of the Bay of Kiel and the ‘ Limanes’ of the Black Sea are instances. FISCHER F 66 RESPIRATION OF BACTERIA Colourless and coloured species are almost always found in close proximity to one another—the colourless forms on substrata of all kinds, the coloured ones in spots exposed to a strong light. The white furry coating generally consists of filamentous forms, particularly of the unbranched non-motile filaments of the delicately-sheathed Zhéothrix, anchored by their bases to the bodies on which they grow. Here and there among them one finds the free-living, slowly-oscillating filaments of Beggiatoa (Fig. 17 a-c) ; unicellular colourless species also occur. The coloured forms (Erythrobacteria*) present a greater variety. The genus Chromatium (particularly C. Okenit) consists of short, plump, rod-shaped or ovoidal cells which are often present in such numbers as to give the water a reddish tinge. Thiospirillum is a corkscrew-shaped form. The dirty pink scum that coats stones and vegetation in sulphurous waters consists generally of a mixture of non-motile species, small tablets of spherical cells (TAéopedia), cylindrical species, and zoogloeae (Lamprocystis, Fig. 17 e). Winogradsky gives descriptions of nine genera. The very fact that the red sulphur bacteria collect at those spots where the illumination is strongest would seem to indicate that there is some relation between the light and their physiological processes. To understand this connexion, however, we must first try to gain some conception of the physiology of the colourless forms. In these it is only the part played by the sulphuretted hydrogen that is clearly understood, but it is highly probable that they are prototrophic in habit. The waters in which they naturally occur contain only traces of organic matter}; they will not grow at all upon highly nutritious media like peptonised gelatine. Asa source of carbon, minimal quantities of formic or propionio acid suffice, and for nitrogen, traces of ammonia, all substances which are common products of putrefaction. They are strictly aerobic, and do not need light. They grow best in water containing 100 milligrams SH, per litre, but are killed by a saturated solution of the gast. If filaments of a sulphur bacterium already loaded with sulphur be placed in pure water they lose it all in from twenty-four to forty-eight hours (Fig. 17 @-c), and finally die from ‘ sulphur- hunger.’ But if, before it be too late, they be replaced in water containing SH, they recover and continue to grow, the SH, being oxidised and the free sulphur stored up in the protoplasm of the cells. The disappearance of the sulphur when the bacteria are placed in pure water is due to a further oxidatory process by which sulphuric acid is produced. This unites with the lime dissolved in the water to form gypsum. Other bacteria common in marshy places, such as Cladothrix and Spirillum, as well as mould-fungi, * This term is suggested as perhaps the best equivalent of the German word ‘ Purpurbakterien,’ + In Weilbach water only 0.0048 gram per litre, yet sulphur bacteria grow vigorously in it. = 4-56 grams SH, per litre. The Stachelberg spring contains 0.073 gram. SULPHUR BACTERIA 67 are not able to live in water containing SH,; they perish where Chromatium or Beggzatoa thrives. Seeing that a solution of SH, in water is very easily decomposed by the oxygen of the air* and free sulphur deposited, the sulphur bacteria would be able to take advantage of this oxidation for their life-processes, even if they merely had the power of existing in H,S solution. The H,S entering their cells would be oxidised by absorbed atmospheric oxygen, and the sulphur set free would represent an abundant source of energy for further oxidation. To explain the facts observed we need only assume further that the protoplasm increases the oxidizing power of the atmospheric oxygen and renders it ‘active. The amount of energy gained is very consider- able. The oxidation of the dissolved SH, gives seventy-one calories, and the further conversion of the freed sulphur into sulphuric acid no less than 2,109 calories. The fact that the thiobacteria can dispense entirely with organic com- pounds which might be burnt up to CO,, together with their inability to live without sulphur, shows that it is the oxidation of the sulphur alone which takes the place of the respiratory processes of other organisms. The two great physiological processes, the assimilation and storage of respirable material on the one hand, and the liberation of energy by its oxidation (respiration) on the other, may be represented in a tabular form. The following scheme shows the processes in green-plants, meta- trophic bacteria and sulphur bacteria : ASSIMILATION OF RESPIRABLE MATERIAL. INTAKE. STORAGE. OUTPUT. GREEN PLantTs | Carbonicacid avd water | Carbohydrates Oxygen plus the energy of sun- light METATROPHIC Organic substances (e. g. BACTERIA sugar, which is not stored but burnt up at once) SULPHUR Bac- | Sulphuretted Hydrogen | Sulphur Water TERIA and Oxygen * In presence of cotton-wool or some other porous body it is even oxidized to H,SQ,. 68 RESPIRATION OF BACTERIA RESPIRATION OR LIBERATION OF ENERGY. SOURCE OF RESPIRATORY GAIN IN ENERGY. Gas. BEE ENERGY. GREEN PLants | Carbohydrates Oxygen Carbonic acid | more than 6,000 and water calories METATROPHIC | Organic sub- Oxygen Carbonic acid | more than 6,000 BACTERIA stances (e.g. and water calories sugar) SULPHUR Bac- | Sulphur Oxygen Sulphuric acid | 2,109 calories TERIA These two tables give, of course, only a general view of the broader outlines of the processes. Real and apparent exceptions will occur to the student, but they do not impair the validity of the schemes as a whole. The green plants derive from the sun the enormous amount of energy necessary for the formation of carbohydrates out of carbonic acid and water, and set it free again in the process of respiration. The metatrophic bacteria make use of highly combustible organic compounds which they oxidize at once, and the sulphur bacteria are able at little cost to store up sulphur. The oxidation of this sulphur represents a very abundant supply of energy, a supply that is probably far more than sufficient to cover the wants of the organism living under the conditions already described, and building up its protoplasm from the minute traces of fatty acids and ammonia contained in the water it lives in, The question therefore naturally suggests itself whether the bacteria have not some other use for the surplus energy. We know that the nitrifying bacteria are able, without sunlight, by means of the energy they obtain from the oxidation of nitrogen, to seize and assimilate the CO, of the atmosphere, and perhaps the Thiobacteria are able to do the same with the much more abundant energy derived from the oxidation of sulphur. Should this supposition turn out to be true, we should have in the colourless sulphur bacteria a group transitional as regards their physiology between the Erythrobacteria and bacteria of ordinary metatrophic habit (37). The Erythrobacteria or coloured sulphur bacteria are unique in possess- ing the power of assimilating CO, in the presence of sunlight by means of a special red colouring-matter (Bacteriopurpurin) which exercises a similar function to that of the chlorophyll of green plants. Engelmann has shown that the spectrum of Bacteriopurpurin is of a very peculiar character, having in addition to an absorption band between B and C another very broad one in the region of the invisible ultra-red, where the wave length is from 0-8 to og p. By the bacterial method he was able to prove that oxygen was evolved in both these regions, showing that the invisible heat rays are utilized for the assimilation of CO, just in the same IRON BACTERIA 69 way as those of the visible spectrum. The Erythrobacteria have therefore a double source of energy, the oxidation of sulphur and the absorption of sunlight, a great advantage to them in the struggle for existence, inas- much as they would be able to subsist in places where, from want of sulphuretted hydrogen, the colourless Thiobacteria would perish. What products arise from the assimilation of the CO, is not known; starch has not been detected. The Erythrobacteria are among the most sensitive phototactic organisms known, the slightest diminution of brightness repelling, the slightest increase attracting, them. The actively motile chromatia can be led about under the microscope at will by suitable manipulation of the light. The importance of the part which the sulphur-bacteria play in the economy of nature lies in their behaviour to sulphuretted hydrogen. They take this gas—a useless and injurious product of organic decay—and work it up into sulphates, substances which are assimilated by other organisms, and used to build up new life. Hardly less remarkable in their nutrition than the sulphur bacteria are the ‘iron-bacteria’ (ferrobacteria, 38), which resemble them somewhat in their prototrophic respiration. Our knowledge of these organisms is still very fragmentary. Stagnant pools in marshy places are often covered by a greasy-looking brownish scum, that consists mainly of ferric hydroxide, Fe(HO),, together with organic matter and some phosphate of iron. The ferruginous matter is deposited as bog iron ore. By the action of reducing substances arising from putrefaction, the ferric compounds, particularly ferric hydroxide, are reduced to ferrous compounds, which are dissolved by and unite with the CO, in the water to form ferrous carbonate. The atmospheric oxygen alone is sufficient to convert this back slowly again into ferric hydroxide, and cause its precipitation, but Winogradsky has shown that the change is not purely chemical, and that here, too, bacteria step in and accelerate the process. In the iridescent deposits of the pools enormous numbers of short brittle tubes are found. These are the broken sheaths of an unbranched filamentous bacterium, that may be called for the present Lepiothrix ochracea. These yellowish-brown sheaths are coloured blue by hydrochloric acid and ferrocyanide of potassium; they contain ferric hydroxide. Specimens of bog iron ore from Siberia, Sweden, and North Germany contained, in thirty-three samples, only three with large amounts of these sheaths. Besides the empty sheaths vigorously growing mats of Leptothrix are always found, some with the cylindrical cells still 2 sdtz, others where they have already swum away in the form of gonidia (as in Cladothrix). By placing the bacteria in water containing CO, the iron may be dissolved out of the sheaths, leaving them colourless. If these bleached filaments be then put into a weak solution of ferrous carbonate of a concentration correspond- 7o RESPIRATION OF BACTERIA ing to that of the pools, the sheaths become coloured anew. It is, however, only those which contain living cells that take up iron; the empty sheaths remain colourless. It is evident from this that the living bacterial cell hastens the oxidation of the ferrous carbonate, just as it does the oxidation of SH, in the Thiobacteria. In the iron bacteria, too, some energy, albeit a very small amount, is gained in the process. Since the sheaths and cell membranes of other aquatic plants (e.g. Cladothrix and Crenothrix among the bacteria, Conferva (Psichohorrmium) among the filamentous algae) are also turned yellow by the deposition of iron oxide, it has yet to be seen whether the iron bacteria form a separate biological group. Their nutrition as regards carbon and nitrogen also needs further investigation. They are doubtless prototrophic. It would be justifiable from some points of view to consider the acetic bacteria in this section, but they can be more conveniently treated of with the other fermentation bacteria. CHAPTER VIII INFLUENCE OF PHYSICAL AGENTS Light, Electricity ; Pressure, Temperature, Dryness and Moisture ; Disinfection by means of Physical Agents. THE Erythrobacteria are the only forms in which nutrition is influenced by light, as in the higher plants. It is the predilection for light which causes Chromatium and other motile species to seek out the brightest parts of the vessels they are kept in, forming a reddish coating on the side of the glass. All other pigment bacteria, most of which are only chromoparous, are quite destitute of the power to assimilate and split up CO,, although they naturally absorb certain rays of light. The pigment is in fact only an ‘accidental’ by-product of bacterial life; it is formed just as abundantly in the dark as in the light, and as a result none of the chromogenic bacteria become bleached or ‘etiolated’ when light is excluded. This alone shows that the pigment does not play the part of the chlorophyll of higher plants. But whilst bacteria grow just as well in darkness as in weak diffused daylight it is necessary that the illumination should remain within certain limits, the overstepping of which leads, in our cultures at all events, to the injury and death of the cells. Very numerous experiments have been made to show the deleterious effect of light on bacteria (39), but it must not be forgotten that the conditions under which bacteria occur in nature are not those of our artificial cultures, be they on solid media or liquid. In the transparent gelatine and agar it is impossible for them to obtain any shade whatever, whereas in nature, in ponds and rivers for instance, the minutest algal cell or particle of mud offers abundant shelter. It seems therefore certain that diffuse light in nature is innocuous, and even bright sunlight can only destroy a limited number, and drive the motile forms to seek shelter from 72 INFLUENCE OF PHYSICAL AGENTS the direct rays. We are certainly not justified in supposing that the sunshine causes disinfection on such a scale as would lead to the self- purification of rivers (40). In cultures, both spores and vegetative bacterial cells are killed by exposure to direct sunlight for two or three hours, and it is to the actinic rays, not to the heat, that the deleterious effect is due. All parts of the spectrum, however, are not equally efficacious, for if the light before falling upon the bacteria be allowed to pass through coloured solutions, such as bichromate of potash or ammonium cupric oxide, we find that it is only the more refrangible rays that have the power of arresting growth. It has been shown that freshly inoculated broth cultures of typhoid bacilli, exposed for eight hours to light that had passed through a solution of bichromate of potash, grew well, the broth becoming turbid with the organisms. If instead of bichromate an ammoniacal copper solution was used, the bacilli would not grow at all, the broth remaining clear even after five days. Leaving aside the question as to whether the culture medium itself is injuriously changed, it is evidently the blue end of the spectrum —the photochemically active rays—that destroys the bacteria. These rays too inhibit the formation of spores in the common mould-fungus (Botrytis cinerea) during the day. Only at night is it able to develop the reproductive cells, In some fungi, on the other hand, light is necessary for fructification. Such are the little (1-2 mm. high) P2/obolus that projects its ripe sporangia more than a metre into the air, and Coprinus, both forms common on horse-dung. These become etiolated in the dark just as would a chlorophyll-bearing plant. Such examples show that it is not possible to formulate definite laws as to the action of light on colourless fungi (41). Possibly there are other ‘photophile’ bacteria besides the pigmented Erythrobacteria and their highly sensitive ally, the B. photometricum of Engelmann. Asa general rule it is necessary to keep bacterial cultures in the dark, or protect them at least from intense light. Weak diffused light does no harm. For practical purposes of disinfection on a large scale, light (even bright sunshine) is unsuitable. Strong electric currents (44) are fatal to bacteria, their protoplasm being killed and no doubt altered in the same way as that of other plant cells is, although some of the deleterious effect may be due to the electrolytic dissociation of the nutrient media, and to the increase of temperature that the current may cause. These drawbacks are a great hindrance to the employment of electric currents for the disinfection of food-stuffs. Attempts have been made (43) in distilleries to destroy by this means the harmful bacteria without injuring the yeast cells. Currents of about 5 amperes were employed, but the practical difficulties of the process are very great, and have not yet been entirely overcome. EFFECT OF HIGH PRESSURE. ON BACTERIA 73 Weak currents act on bacteria presumably in the same way that they do on infusoria and other motile micro-organisms (44). These are ‘ galvano- tropic’; they collect around the kathode (negative pole). If the direction of the current be reversed, the infusoria also turn round 180 degrees, place themselves parallel to the current, and swim towards the other (now negative) pole. Experiments with bacteria. have not yet been made, and they would be very difficult on account of the small size of their cells. Very numerous and thorough experiments have been made as to the effect of Rdxtgen rays upon bacteria, and it has been conclusively shown that they are not even inhibitory, let alone fatal to the cells (45). The higher plants behave in the same way, and the hopes that were entertained of being able to disinfect the diseased body by means of Rontgen rays have not been realized. High pressure (46) seems to be.absolutely without influence upon bacteria. The processes of putrefaction and alcoholic fermentation go on without interruption under a pressure of from 300 to 500 atmospheres, and the spores of the anthrax bacillus are unchanged after exposure for 24 hours to 600 atmospheres. In considering such facts as these it must not be forgotten that the weight supported by a single bacillus (say of 5 « by 1 w) is extraordinarily small (even at 500 atmospheres only about 80 milligrams), so that even at the bottom of the deepest ocean at a depth of 7,086 metres a coccus of 2 « diameter would only have to withstand a pressure of go milligrams. In the face of these facts we are hardly justified in saying that bacteria are less sensitive to pressure than other organisms, because the behaviour of the larger plants and animals seems to be in this respect incommensurate with that of bacteria. The force of gravity exercises upon bacteria no effect comparable with the geotropism of other plants. Bacteria, like higher plants and cold-blooded animals, are organisms whose temperature corresponds to that of their environment, falling and rising with the external temperature ; they are pockilothermic (47). The relations of the cell to temperature are expressed by specifying three points on the thermometric scale, the maximum, minimum, and optimum. These three cardinal points hold good for all organisms. The different functions of Jife are performed best at different temperatures, and the temperatures most favourable to growth, to movement, to fermentative power, to virulence, to sporulation and to germination are probably different in each case, but a general average, coinciding with the most rapid multiplication of the cells, is spoken of as the ‘optimum.’ For all species these three cardinal points vary slightly within certain limits. The following cardinal points are those which hold good for growth. The maximum is that temperature which cannot be exceeded without 74 INFLUENCE OF PHYSICAL AGENTS cessation of growth, the minimum is the lowest temperature at which growth even of the feeblest kind is possible. ; Minimum. Optimum. Maximum, Germinating wheat . ‘ 5-7°C. 29°C, 42-5°C. » gourd. =. = 13-7" 33-7° 46-2° Bacillus anthracis . . 14° 37° 45° » tuberculosis . 30° 38° “42° », thermophilus . 42° 63-70° 72° » subtilis . . 6° 30° 50° 9» fluoresc. liquefac, 5-6° 20-25° 38° » phosphorescens fe) 20° 38° The table shows that wheat seedlings and free living metatrophic bacteria like B. subtilis and B. liguefaciens need approximately the same temperature, while the gourd plant, an inhabitant of warmer zones, requires more, as do also the cholera and anthrax germs, 30° to 40° being the optimum. The phosphorescent bacterium from our cold northern seas has the lowest minimum of any, and at the other end of the scale we find the representative of that curious group the thermophile bacteria. The tubercle bacillus has the narrowest temperature range of all, only twelve degrees separating maximum and minimum. It is, to use an expression borrowed from animal physiology, s¢exothermic, as are all the strict parasites on warm-blooded anjmals. The metatrophic bacteria, on the other hand, are eurythermic, and can endure great variations of temperature with a difference of as much as 30° between maximum and minimum. Bacteria which are pathogenic for warm-blooded animals, and at the same time eurythermic (e.g. B. anthracis), are very probably metatrophic in our climate. The thermophilic bacteria (48), singular as it may seem, are very widely distributed even in our temperate climate, and a large number of species have been isolated from the soil and from sewage. It is difficult to see where these bacteria (mostly non-motile aerobic rods) find the necessary conditions of existence. Strong sunshine sometimes heats the surface of the. soil to 70° C. and might permit the development of such forms, but they must be subject to long periods of quiescence. Manure and other substances that become heated during fermentation are their most likely habitats, In B. thermophilus the optimum reaches the temperature of coagulation of most proteids and the maximum exceeds this. We might be inclined to regard the protoplasm for this reason as different from that of ordinary cells, but we must not forget that in all proteid bodies the temperature of coagu- lation varies very much according to the reaction of the protoplasm, the amount of salts present and other factors, so that we are not justified in looking upon the thermophile bacteria as being miracles of nature. Besides, we know of other organisms that live at very high temperatures. In the hot springs of Ischia and around the ‘fumaroli’ at Naples micro- EFFECTS OF HEAT AND COLD ON BACTERIA 75 organisms are found in water at 60°C. and more. In the drainage from the Carlsbader Strudel (54°) there is a thick growth of Leptothrix with green Oscillariae, and in other thermal springs crustacea and insect larvae are known to occur at 60°. Bacteria may be roughly divided according to the optimum temperature into two great groups, those which grow best at about 20°C. (B. fluorescens, B. phosphorescens, B. prodigiosus, and many other metatrophic forms), and those which need a higher temperature. For the maintenance of a regular high temperature special incubators are used. These secure great uniformity of any desired degree of warmth by the use.of some form of thermostat, and are subject to variations of 0-1 to o-5° only. Still better is a whole room maintained at a constant temperature. Practical details will be found in the works cited in No. 3 of Notes (p. 169). When the temperature at which bacteria are grown approaches either the maximum or the minimum, not only is growth arrested, but all the functions of the cell are enfeebled. Continued cultivation under these circumstances, particularly at temperatures near the maximum, effects injuries from which the cell recovers only very slowly when the optimal conditions are restored. (See Lects. III. & XVII.) Exposure to extreme cold has, apart from arresting growth, very little ill-effect upon bacteria. In this respect they resemble other poikilothermic organisms, falling into a lethargic state (Azbernation). Sporeless anthrax bacilli can endure a temperature of — 26-8° for twelve days without injury, whilst the spores show no decrease of vitality or virulence after exposure for twenty hours to —130°. Long imprisonment in ice and even repeated freezing and thawing can be endured for weeks and months, bacteria be- having in this respect like algae and other water plants. The cold of our winters is therefore quite inadequate to kill bacteria, and the application of artificial low temperature is equally useless as a means of disinfection (49). In sharp contrast to this indifference to cold is the behaviour of bacteria towards heat. If the maximum be exceeded death speedily follows (largely as a result of the coagulation of the protoplasm), and consequently a tem- perature of 50° or 60° C. for ten minutes is sufficient to kill the sporeless vegetative cells of all but the thermophile bacteria. At 70° five minutes is sufficient. It is on this principle that the preservation of tinned foods is now so largely carried on and the ‘ Pasteurization’ of wine (heating for half an hour to 70°) is another instance of its application. In ‘fractional sterili- zation’ as applied to culture media like blood serum, which cannot be heated to 100°, the same result is aimed at, namely the destruction of the vegetative cells. Spores which have resisted the first heating are then allowed to ger- minate and are killed by a second heating, the process being repeated five or six times if necessary until sterility is secured. At the present time hundreds of such sterilizers are in daily use in the service of antiseptic surgery. 76 INFLUENCE OF PHYSICAL AGENTS The spores (47) are always far more resistant than the vegetative cells, and their resistance is proportional to their dryness. This must not be looked upon as a peculiarity of bacterial spores, for all resting protoplasm is resis- tant in consequence of the small amount of water it contains. Grains of corn rendered as dry as possible in a desiccator can endure from 100° to 110° dry heat for hours without losing the power of germination. They are in this respect not far inferior to anthrax spores, which succumb to 140° in three hours. For many objects disinfection by dry heat is impracticable, as they would be injured by the high temperature. The method can, however, be advantageously used for disinfection of the glass ware used in bacteriological work, but for surgical instruments and dressings boiling water or hot steam is to be preferred. Spores are more quickly destroyed by moist heat, although if the temperature of boiling water be not exceeded some hours are necessary to destroy such resistant spores as those of B. swbézlzs and its allies. Anthrax spores are generally killed by boiling water in from two to five minutes, but one must always reckon on finding a few of much greater resistance that need ten or twelve minutes. Moist seeds are much more quickly destroyed, being -killed below boiling point. The cause of the greater resistance of bacterial spores is not known, but probably both the impermeability of the membrane and the durability of the protoplasm playa part. If the impermeability of the membrane be the cause, it is easy to conceive how the spores can remain some time in water before the protoplasm can take up moisture. They would even in boiling water be exposed at first to a dry heat. This view gains in probability when we consider that the spores of 2. subtilis germinate very slowly, many hours passing before they swell and lose their lustre by absorbing water. This stage is passed through more quickly ifthe spores be boiled for five minutes. It seems as though the spore membrane were at first very impervious to water. We know too that this is the case with the resting spores of algae and fungi. The resting cells of other low organisms such as amoebae, infusoria and flagellata, although not yet investigated, are doubtlessly similar in this respect to bacterial spores. The sterilization of fruits and preserves by boiling in closed vessels is familiar to all and has been in use since the last century. A discussion of the various kinds of disinfectors, of the Koch steamer, and the autoclave that by means of superheated steam kills the toughest spores in one minute at 140° would be out of place here. They are used for the sterilization of culture media. The uses to which these physical methods of disinfection are put in public sanitation will be found in text-books of hygiene. All plants, those of our climates as well as those of the steppes and deserts, have to protect themselves against dryness in times of drought. EFFECT OF DESICCATION 77 Mosses and lichens on naked rocks shrivel up to dry friable masses, falling into a resting condition in which they remain for weeks without losing the power of growing again as soon as they receive moisture. The algae of ponds and those that live on soil that is only periodically wetted can also withstand drought for months. In all these cases it is the whole plant that falls into a resting-stage, in which it can retain its vitality for long periods, although not for an unlimited time. Among animals, too, many instances are known (rotifers, tardigrada, anguillulae) in which the whole organism can remain dried for weeks and months, and then be recalled to life by moisture. Organisms which are provided with a morphologically specialized resting- stage (spores, cysts, or seeds) can still better resist the effects of dryness. The spores of the Smut fungus, Ustilago carbo, germinate when placed in water, even after lying for ten years in an herbarium; and wheat grains sprout after ten or even twenty years if they have been carefully protected from moisture. This suspension of vitality cannot, however, go on for unlimited periods, and the miraculous stories of ‘ mummy wheat’ germinat- ing after thousands of years are certainly fabulous. The spores of bacteria (50) can also remain dormant for a very long time ; those of Anthrax, for example, germinate after ten years’ quiescence. Thus the resting-stage among bacteria is of similar duration as among other organ- isms, and is shortened in the same manner by moisture or damp air. Many bacteria can resist drying for long periods even in their vegetative condition. Dry tubercle bacilli retain their virulence for weeks, as do also the bacilli of diphtheria and typhoid fever and pus cocci. True aquatic bacteria, on the other hand, such as the cholera vibrio, are killed by drying in from two to five hours *. For the purposes of practical disinfection drying is not applicable, but it seems to play an important part in the destruction of bacterial cells in nature. Still, if dried bacteria, during short periods of moisture such as continually occur, can find suitable nutriment they revive again, and multiply, only to fall again into the resting-stage. For this reason it is not to be expected that disease products, or earth contaminated with organic substances, will be spontaneously disinfected by mere exposure to the air. * For the relation of these phenomena to infectious diseases see Chaps. XV. and XVI. CHAPTER IX THE ACTION OF CHEMICALS—CHEMOTAXIS AND CHEMICAL DISINFECTION EXAMINATION of a drop of stagnant water under a medium-power objective shows that the bacteria and infusoria it contains are not evenly distributed through the liquid. They gather in clouds around particles and flocculi of decaying organic matter, to which they seem to be attracted as fish are attracted by bait, or ants by aphides. ‘Instinctive’ is the term (favoured of anthropomorphists) applied to such actions when performed by the higher organisms, and yet we see them here carried out with unfailing accuracy by creatures whose whole body consists of but a single cell. Are then the bacteria too to be credited with instinct? That would indeed be a surprising conclusion ! This capability shown by unicellular organisms of being attracted by food-stuffs was first carefully studied by Stahl (51). He showed that the naked protoplasmic masses which form the plasmodia of the myxomycetes were affected by a nutritive body placed in their neighbourhood. They turned towards it on whichever side it was placed, suggesting by this action the term Trophotropism as a suitable descriptive name for the phenomenon. At about the same time Pfeffer (52) investigated from a more general chemical standpoint the effects of such stimuli upon the movements of bacteria, protozoa, and the spermatozoids of the higher cryptogams, and was able to show that the nutritive value was not the sole and only determinant, but that other more recondite factors were involved, factors based on the chemical constitution of the substance employed asa stimulant. For this reason he introduced the now generally adopted expression Chemotaxis. Pfeffer’s method for the study of the chemotaxis of bacteria is simple and efficient. A capillary tube, sealed at one end and about 5-10 mm. long, is half filled with the liquid to be tested, e.g. a 5 per cent. slightly alkaline solution of Liebig’s Extract, or of peptone, in such a way that a bubble of air remains in the closed end. The outer surface of the glass is carefully cleaned from any traces of the broth, and it is placed in a drop of water containing bacteria in such numbers as to be slightly turbid. In five or ten seconds it can be seen that the bacteria are more thickly congregated ‘around the open end of the capillary than elsewhere, and in a few minutes CHEMOTAXIS 79 they form a dense swarm there, and begin to enter the tube. The move- ments of the bacteria in the drop become more lively as soon as the diffusing peptone reaches them, and at the entrance of the tube they are a whirling, ‘buzzing’ mass, like hiving bees. The potential energy of the food-stuff has been converted into the kinetic energy of the vibrating cilia. If now a cover-glass be laid upon the drop another kind of chemotaxis can be observed. The bacteria which have entered the tube move upward, attracted by the air in the blind end, and in about half an hour that section of the capillary immediately below the bubble is plugged by a thick mass of organisms. But these phenomena, the attraction by food and the attraction by air, might as well be called tropho- tropism as chemotaxis, the latter being shown in its purest form when solutions of salt are employed. e@ ® For instance, a 1-9 per cent. solution of KCl has a powerful effect, and draws the bacteria into the q yl tube just as peptone does, being still feebly at- mee tractive even ina dilution of o-o19 percent. Among a; the alkalies, potassium is chemotactically the most powerful, then sodium and rubidium. The alkaline ABR earths are less effective. The influence of a salt ‘ee hat be is attributable mainly to its electropositive con- Sl a stituent, the acid radical acting much more weakly. Fic. 18 Chemotaxis. A part Further details of this interesting subject will $.a0? fronene Moma efa- : : ; ill be found in the works of Pfeffer already cited. eens; and 3 party! fein : : : ae t.weakly alkaline pept Among organic substances with a high nutritive [Clution; at Y an airbubble. eee : About 4 minutes after introduc- value, asparagin and peptone may be mentioned as __ tion of capillary, the bacilli have co 5 = collected round the open end of being strongly chemotactic, whilst sugar, one of the tube, positive chemotaxis. . 3-4 hr. later, the bacilli, driven the best food-stuffs and richest sources of energy, by want of oxygen, have collected 5 ‘ 4 a 4 close to the air-bubble. From has but little attractive power. Glycerine is in nature. Magn. 50. all cases, as far as is known, inactive. Contrasting with the phenomena just described, is the power which certain substances have of repelling bacteria. This is known as negative chemotaxis. Free acids and alkalies have this effect, and capillaries filled with their solutions invariably remain empty. Alcohol too is ‘ instinctively ’ despised by micro-organisms. In some salts the action of the acid radical and that of the base neutralize each other (e. g. carbonate of ammonia 1-76 per cent., phosphate of potash (monobasic) 3-48 per cent.), and the bacteria then take up a mean position at a certain distance from the mouth of the tube. In the case of negatively chemotactic compounds, the poisonousness of the substance is no more a criterion of its repellent power than the food value is an index of the attractive power in positively chemotactic bodies. For instance, a solution of 0-019 per cent. potassium chloride plus o-o1 per 80 CHEMOTAXIS AND CHEMICAL DISINFECTION cent. mercuric chloride attracts bacteria by reason of the potash it con- tains, but they rush into the tube only to meet their death from the mer- cury salt. It would therefore seem that chemotaxis, useful as it must be to bacteria in the search for food, may lead them to destruction, although of course they are not exposed in nature to the temptations of such fatally seductive capillaries. If the facts gained by these experimental observations are to be employed to elucidate the life-history of bacteria in their natural habitats, in water, in the soil, or in the tissues of the diseased body, a number of con- siderations must be borne in mind. In the first place, chemotaxis can only take place in media which permit free movement, in liquids. Secondly, different kinds of bacteria by no means react in the same way to the same substances. Furthermore, it must be remembered that the sphere of influence of such a capillary is very small. It is not possible to entice into it all the bacteria swimming in the drop. It would not be possible, even if we could renew the solution in the capillary as fast as it diffused so that it could continually give off a diffusion-stream, as perhaps the decaying flocculi in stagnant water do. For the bacteria would be already stimulated by the diffused substance, and to enable them to again react chemotactically a much higher concentration would be necessary. Pfeffer has shown that “Weber's Law’ (Psycho-physical law of Fechner), which formulates the relation between strength of stimulus and intensity of sensation, holds good for the chemotactic movements of bacteria. Weber’s law is to the effect that an external stimulus just sufficient to give rise to a sensation must be increased in a definite ratio in order to awaken that sensation again. For instance, a weight of one ounce laid upon the hand gives rise to the sensation of pressure upon a certain spot. If now upon the weight a further load of #5 oz. be laid no further sensation is aroused. Not until the original weight has been increased by one-third (i.e. to 1-33 0z.) is the sensation of pressure aroused again. Had ten ounces been the weight originally employed it would have had to be raised to 13-33 ounces. For thermal stimuli the increase must amount to jth, and for visual stimuli to ziath of the original stimulus in order that it should again cross the threshold of sensation and enter our consciousness. Precisely the same law governs the phenomena of chemotaxis. In the case of one of the putrefactive bacteria the stimulus has to be increased five times before chemotactic movements are again set up. If the organism be already in a or per cent. solution of extract of meat the capillary must contain a o-5 per cent. solution, if it be in 1 per cent. the tube must be filled with 5 per cent. bouillon before a reaction follows, while to start very active movement we should have to fill the tube with a broth ten or twenty times as strong as the surrounding fluid. These facts should not be forgotten when we attempt to explain by chemotaxis the behaviour of bacteria in the living body, or the CHEMOTAXIS 81 emigration of leucocytes towards a bacterial focus (53). An exact knowledge of the conditions involved is impossible, inasmuch as the composition of the fluids in which the tissues are bathed and the amount of chemotactic substances they contain are entirely unknown. For this reason considerable discretion must be exercised in the use of the word chemotaxis if it is not to become a mere shibboleth (see Ch. XVII). In the case of some substances, peptone for instance, the absolute amount sufficient to cause perceptible reaction is very minute. Pfeffer calculated that a capillary filled with o-or per cent. peptone solution, a strength just sufficient to attract bacteria in water, contained only guv0deee0 Of a milligram of peptone. And yet compared with the size of the bacterial cells this quantity is not disproportional. Like all other processes that depend ultimately upon the activity of the living cell, the phenomenon of chemotaxis is extremely obscure. This much however we know, that the effect of the substances diffusing from the capillary is to cause the bacteria to turn (hence chemo-/azis) in such a way that their longer axes are parallel to the direction of the diffusion stream. They then swim either against the stream (positive chemotaxis) or with it (negative chemotaxis). Why one substance should act positively and another negatively is at present quite inexplicable. A more detailed discussion would be beyond the scope of this treatise, and would be at best fragmentary. Those substances which in weak solutions exercise a positive action on bacteria have in some cases (KCl 19 per cent.) the same effect when the solution is concentrated ; in other cases the bacteria are repelled. Neutral salts such as KCl and NaCl can be endured in very high concen- trations. The hay bacillus, for instance, grows well in an infusion containing 9 per cent. NaCl, 5 per cent. sal ammoniac, 11 per cent. KCl, or 10 per cent. KNO,. Such substances are not poisonous, and arrest growth finally by the osmotic pressure they set up. Of great interest are those poisonous compounds which even in minute quantities destroy the life of the cells. They are not by any means especially poisonous for bacteria. A one-tenth per cent. solution of corrosive sublimate (HgCl,) kills tubercle bacteria in ten minutes, and the cells of algae are destroyed just as soon, if not sooner. In a I per cent. solution of carbolic acid both tubercle bacilli and ordinary plant cells are killed in one minute. With few variations and exceptions the protoplasm of all organisms is destroyed in about the same time by the more powerful poisons. The destruction of bacteria by poisons—chemical disinfection (54)—is employed in all cases where the application of the methods described in the last chapter is impossible on account of the injury caused by the heat. The resistance of bacteria to chemicals is not only different in different species, but varies also according to many external circumstances. It is greatest when the organisms are growing under the most favourable FISCHER G 82 CHEMOTAXIS AND CHEMICAL DISINFECTION circumstances, when temperature, food, and other conditions are all optimal. Bacteria are, in short, like all other organisms, strongest and most resistant when they are in the best health. There is always a great difference between spores and the far less resistant sporeless vege- tative cells, so that a disinfectant can only be considered effective when it is able to kill spores. In pr.ctice, circumstances may sometimes arise when this requirement may be dispensed with. Every disinfectant must be tested on the following three points : I. In what concentration must it be added to a given substratum in order to prevent the development and multiplication of bacteria without killing them? This is the coefficient of inhibition. 11. What is the shortest time in which sporeless bacterial cells in water at 20°-25° C. are killed by a substance in medium concentration (i.e. not sufficient to cause plasmolysis or other injury)? This is the zzferdor lethal coefficient. 111. What is the shortest time in which, under the same conditions, the spores are killed? This is the superior lethal coefficient. Laborious investigations without number have been made with the object of determining these three values for all kinds of organic and inorganic compounds, and we have now a number of carefully-chosen substances that are suitable for use as disinfectants. The following tables give a few examples. Further details will be found in the works cited in Notes 3 and 54. I. COEFFICIENT OF INHIBITION FOR ANTHRAX BACILLI IN OX-BLOOD SERUM. From Behring (54). The numbers indicate the number of cubic centimetres of serum in which one gram of the solids or one cubic centimetre of the liquids was dissolved ; for instance,‘ Corrosive Sublimate, 10,000’ = 1 gram HgCl, in 10,000 c.c, serum : Cyanin and malachite green. ‘i . : : 40,000 Nitrate of silver . F : ‘ ‘ i if 30,000 Corrosive sublimate . é a ‘ a é : 10,000 Trichloride of iodine ‘ 3 a : z . 1,500 Caustic soda. é . ‘ . . ‘ i 1,500 Cadaverin (bacterial toxine) . F 3 : F 1,500 Quinine hydrochlorate . . . ‘ 5 3 500 Carbolicacid . . . : : . e : 500 Thymol . . Sa 3 . : : 3 250 Salicylate of soda. ‘ ‘ ‘ é 3 é 150 Alcohol. ‘ : ; ‘ : . : 15 Common salt . : . . F : . ‘ 15 The extraordinarily small quantities which are in some cases sufficient to COMPARATIVE EFFICACY OF DISINFECTANTS 83 prevent putrefaction do not kill the bacteria, they only arrest growth and multiplication. II, LETHAL VALUE FOR SPORELESS TUBERCLE BACILLI. + Inferior lethal coefficient; the time is given in which tubercle bacilli (from cultures, not in sputum) are killed. From Yersin (54). Carbolic acid . . : . . 5% 30 seconds 5 ane 7 ‘ . ‘ 1% 1 minute Absolute alcohol. , : 7 pie 5 minutes * Todoform 3 F ‘ 4 é 1% 5 35 Ether . . . . . beaks Io ,, Corrosive stiblimate 5 ; 0-1% 10, Thymol . : z 3 . : 03% 3 hours Salicylic acid . a 7 : s 0-25% 6, To kill the bacteria in sputum, where they are embedded in mucus, a much longer time is necessary, e.g. 10 per cent. lysol for twelve hours. The figures in the table were obtained by mixing tubercle bacilli from a growing culture with the fluids, taking out samples from time to time, and sowing them on culture media. The values given may be regarded as being good for most sporeless bacteria, the sensitiveness of which is illustrated by this example. III. LETHAL VALUE FOR ANTHRAX SPORES. From Paul u. Krénig (55). Substance. Concentration. Time (Temperature 18° C.). Corrosive sublimate Z 1-7 % ( 16litres) 12-14 minutes ” . s . 084% ( 32» ) 24-30 ” ” : . : 0-42% (64 5 ) 45-60 ” af . , o2 % (128 ,, ) 60-80 e 35 ei . or % (256 ,, ) more than 120 minutes Nitrate of diver : ‘ 425% ( 4 » ) , 15-16 minutes 0-08% (200 ,, ) not in 10} hours Sulphate ‘of copper . : 16 % ( 1 4 ) notin 10} days Sugar of lead . ‘ 7 325 % ( I 5 ) notin7 95 Sulphuric acid . é 49 % ( 2 4, ) not in 30 hours Caustic potash ‘ ‘ 56% ( 1 4 ) 18 hours Permanganate of potash . 395% ( 4 5 ) 40 minutes Bichromate of potash. 74% 4 5 ) notin 4 days Permang. of potash, 8 litres, plus 8 litres HCl 5 minutes Chlorine water 7 . 022% ( 32litres) 2 ,, Bromine water : fs 05% (32 » ) 2 55 Carbolic acid : : 5 4 agence not in 24 hours Formaldehyde . 4 5 # sical 120 minutes The lethal concentration for spores is determined in the following way. A suspension of the spores in water is dried upon silk threads, pieces of glass, or, better still, upon carefully-cleaned garnets, which are then laid in the disinfectant. Specimens are taken out at intervals and sowed in nutri- G2 84 CHEMOTAXIS AND CHEMICAL DISINFECTION tive media. Before this is done, however, the threads or garnets, as the case may be, must be freed from any adherent disinfectant. Washing with distilled water is not enough for this, they must be rinsed with ammonium sulphide, and the soluble metallic salts precipitated and rendered harmless. Only in this way is it possible to obtain reliable results, for the small quantity of disinfectant adherent to the spores, although not sufficient to kill them under ordinary circumstances, might do so during the stage of imbibition, and would certainly destroy the germinating rod, thus giving a false idea of the disinfecting power of the substance. In the examples given in Table III, from 15,000 to 20,000 spores were killed in the stated times. The concentration is given in per cents. and also in terms of ‘molecular dilution’; for instance, ‘Corrosive Sublimate, 16 litres,’ means that sixteen litres of the solution contain the molecular weight of HgCl, (i.e. 271) expressed in grams, so that 100 c.c. of the solution contains #43 grams =1-7 grams. This method of calculation, so much used-in modern chemistry, is given because it permits an easy comparison of different salts—a comparison of molecule with molecule, so to speak. According to Koch absolute alcohol, concentrated glycerine, concentrated NaC] solution, and distilled water do not destroy anthrax spores, even after acting on them for months. The table shows that the halogen elements (chlorine, bromine, iodine) are the most powerful, and, among the metallic salts, corrosive sublimate. Nitrate of silver has some little effect, but sulphate of copper and acetate of lead are powerless. Free acids or free alkalies must be very strong to act as disinfectants. Chromate of potash, too, although it is a powerful oxidizing agent, has little germicidal power, whilst potassic permanganate, far less effective as an oxidizer, is a powerful disinfectant. Tables II and III show the great difference between spores and vegeta- tive cells in their behaviour to disinfectants. Five per cent. carbolic acid, for instance, which kills tubercle bacilli in thirty seconds, does not destroy anthrax spores in twenty-four hours; with o-1 per cent. sublimate, the times are ten minutes and sixty or eighty minutes respectively. Absolute alcohol, powerless against anthrax spores, kills tubercle bacilli in five minutes. The resistant power of the spores depends, no doubt, principally on the great im- permeability of the spore wall to dissolved substances of all kinds. This property is shared by the cysts and membranous coatings of all low organisms in the resting-stage, and by the seeds of plants. A resting-stage of long duration is indeed inconceivable without some such protection. In plant seeds and algal spores the impermeability is caused by the deposition in the membrane of fats and resinous bodies, and possibly the spore wall in bacteria is protected in the same way. Another cause of the durability of spores is the density of the protoplasm, which contains less water than it does in the vegetative cell. The great efficacy of corrosive sublimate as a disinfectant seems at first DISSOCIATION OF SALTS 85 sight to be only a special case of the toxicity of all mercury salts, and formerly it was thought that they were equally poisonous if only equal amounts of the metal were present. Equimolecular solutions therefore were supposed to be necessarily of equal disinfectant power. Recent investigations, however (55), based upon the modern theory of solutions, have proved this to be wrong, and rendered it probable that the toxicity of a poisonous salt varies with the degree of dissociation. The dissociation theory (56) has shown that in a solution of a salt there are present not only the unaltered molecules of the dissolved substance, but also a certain number of disintegrated or ‘ dis- sociated’ molecules. Ina solution of HgCl,, for instance, a certain propor- tion of the HgCl, molecules are split up into their electrically active components or ‘ions,’ the positive metallic ions (kations) Hg, and the negative ions (anions) Cl]. The degree of dissociation, that is to say, the proportion of dissociated molecules to unchanged HgCl, molecules, changes with the concentration of the solution, the temperature, and other conditions, and different salts of the same metal are dissociated in different degrees. Now many of the physical properties of a solu- tion, such as electrical conductivity, freezing-point, boiling-point, and osmotic pressure, depend upon the degree of dissociation, and it seems very probable that toxicity does also. Since different salts of mercury are very differently dissociated in watery solutions, we might expect that their toxic powers would be different also, and as a matter of fact we find this to be the case. A sixteen-litre solution (1-58 per cent.) of mercury cyanide, a salt which is but very slightly dissociated, does not kill staphylococci in three minutes, whilst a solution of corrosive sublimate only a quarter the strength (i.e. sixty-four litres, 0-4 per cent.) does. Anthrax spores left for twenty minutes in this solution of sublimate were almost all killed (seven colonies grew), whilst after a sixteen-litre solution of the cyanide, acting for the same time, innumerable colonies sprang up. A comparison of differently dissociated mercury salts shows clearly, therefore, the relation between dissociation and toxicity. The connexion becomes more striking still when we compare the same salt in different degrees of dissociation. The proportion of the dissociated molecules to the unaltered molecules in a given solution of a salt is constant. For example in a solution of HgCl, the proportion of Cl ions to unchanged Hg Cl, molecules is constant. By adding other chlorine ions, for instance by adding the more strongly disso- sociated NaCl, the number of dissociated Hg Cl, molecules can be reduced, the reduction being dependent on the ratio between the amounts of disso- ciation of HgCl, and of NaCl. Let us suppose a sixteen-litre solution of Hg Cl, to contain x Cl ions and y unchanged molecules, then, broadly speaking,” = c (a constant). If, now, there be added enough solid NaCl, 86 CHEMOTAXIS AND CHEMICAL DISINFECTION which is more readily dissociated than Hg Cl,, to make a sixteen-litre solu- tion, there will be present ++ Cl ions derived from the NaCl. For the pure HgCl, solution += cy, but for the HgCl, plus NaCl solution a+(4+m)=cy or x = aoa In other words, the number of Cl ions derived from the Hg Cl, is reduced, its degree of dissociation is lessened, and some of the free Hg and Cl ions are built up again into complete molecules. The following table shows that as the degree of dissociation is lessened the toxicity is reduced. The figures give the numbers of colonies that arose from approximately equal quantities of spores after these had lain for six minutes in the solutions (55). Number of Colonies. 16 litre Hg Cl, solution . . : . 8 35 4 plus1 NaCl. 7 32 3 a a 2 es ; ; 124 2” 3 ” 3 0 282 ” oe ” 4 ” *: . 382 ” ” ” 46 ” . . 410 ” ” ” 6 ae x * 803 ” ” 33 10 ” . . 1,087 The gradual diminution in germicidal power is unmistakable and needs no comment. These facts must be borne in mind in experiments on the disinfection, by sublimate, of liquids such as serum or bouillon which contain 0-7 per cent. (eight litres) of NaCl. It is evident that more sublimate will be necessary than in fluids free from salt. The presence of peptone or albumen will necessitate a still further addition of sublimate, because some of it will form insoluble compounds with the proteids whereby its toxicity will be reduced. Since the degree of dissociation is dependent upon the nature of the solvent and also upon the temperature of the solution, these factors are of influence on the disinfecting power. The increase of toxicity which accom- panies increased temperature is not, however, solely the effect of augmented dissociation. Although the technique of disinfection has not as yet been affected by these recent discoveries, it does not need much penetration to see their high scientific interest and importance. There are many other bodies besides those mentioned that could be used for disinfecting purposes—anilin dyes, such as methy] violet, ethereal oils, and many aromatic compounds. New disinfectants spring up every day, and are widely advertised, only to disappear again very soon. Gases, such as carbonic acid, carbonic oxide, hydrogen, nitrous oxide, nitric oxide, sulphuretted hydrogen, sulphurous acid, and coal gas, arrest the growth of bacteria in agar cultures exposed to a slow stream of the gas, but the method has no practical value. The ozone in the air, too, DISINFECTION OF THE TISSUES 87 even where most abundant, is in such minute quantities as to be quite without influence. The fact that thousands of bacteria pass through our digestive organs every day suggests the question whether any of the digestive secretions function as natural disinfectants. The saliva and the pancreatic juice are alkaline in reaction and unable to injure bacteria, The pancreatic juice, by reason of the proteids it contains, is even nutritious. The bile acids inhibit the growth of bacteria, but of all the digestive secretions the free acid of the gastric juice (2-3 per thousand H Cl) alone is able to kill them. The action of this even is in any case uncertain, and can only affect sporeless cells. Normal gastric juice ina test tube destroys in half an hour the bacteria of cholera, typhoid and glanders, pus cocci, and the sporeless cells of anthrax and tetanus (57), but spores are not injured by passing through the stomach. To destroy anthrax spores, they must lie for six hours in 2 per cent. H Cl, so that it is evident the gastric secretion with only from -2 to *3 per cent. HCl is quite inadequate, even if allowed to act for days. Even against sporeless bacteria it is of little effect, as the examples quoted show. Bacteria given to animals in their food (B. pyocyaneus, blood in- fected with anthrax, tuberculous tissues) are not entirely destroyed even after six or eight hours (58). Chemical disinfection of the diseased body is not possible, for the tissue cells would be just as much injured by the disinfectant as the bacteria. Nor is it possible to disinfect by chemical means wounds in which bacteria have taken up their abode ; an aztisepsis of wounds is not possible. When a wound cannot be purified by mechanical means the body must be helped to fight against the invaders, and the only way to do this is to secure clean- liness, asepsis. sepsis confines itself to the treatment of wounds with germ-free instruments and dressings without using chemical disinfectants, and is sufficient to prevent clean fresh wounds, such as are made at operations, from becoming infected. As to the cause of the fatal action of disinfectants upon the bacteria we know but little. We know that the salts of the heavy metals, corrosive sublimate or nitrate of silver for instance, coagulate protoplasm. They destroy life probably by precipitating certain substances from the extremely complex protoplasm of the cells. Other compounds, such as alkalies and acids, may perhaps act by the separation and solution of proteid bodies, resulting in a destruction of the protoplasmic structure. Even a change in reaction might cause the precipitation of certain constituents. In most cases, however, the matter is beyond any explanation, because we have no knowledge of the peculiarities of protoplasmic structure on which the phenomena of life depend. CHAPTER. X BACTERIA AND THE CIRCULATION OF NITROGEN IN NATURE 1. Introduction: The Assimilation of Free Nitrogen by the Bacteria of the Root Nodules of Leguminous Plants, and by Bacteria in the Soil. APART from the activity of organisms like the pigment and phos- phorescent bacteria, and the remarkable metabolism of the sulphur- and iron-bacteria, the work of bacteria in nature embraces three great processes : 1. The circulation of nitrogen: effected by putrefaction, the formation of nitrates, and the assimilation of atmospheric nitrogen. 2. The circulation of carbon by the ‘fermentation ’ of carbohydrates and other non- nitrogenous products of animals and plants. 3. The causation of disease in other organisms, particularly in man and the higher animals, There are in nature five sources of nitrogen open to plants and animals: 1. The atmosphere (79 per cent. by volume of free nitrogen), 2. The nitrates of the soil and the traces of nitrous acid formed in the air during thunderstorms. 3. Ammonia, which occurs in minute quantities in the air, and is set free abundantly by the putrefaction and decay of dead organisms. 4. Animal excreta, which contain nitrogen compounds of many kinds, even down to ammonia; and 5. The tissues of plants and animals. The first three of the above-named sources are useless to animals, for these obtain their nitrogen from plants only, either directly (herbivora), or indirectly through other animals (carnivora). To plants, on the other hand, nitrogen seemed until comparatively recently to be available only in one of these three forms. Vegetable physiologists had come to the conclusion that in nature the nitrates of the soil were the one and only form in which nitrogen was taken up by plants. For, although it was known that in experiments plants could be got to take up ammonia salts and even gaseous ammonia, it was evident that ammonia was not a common source of nitrogen in nature. And, finally, the atmosphere, the greatest storehouse of nitrogen in nature, seemed closed to plants. These views, however, were overturned by ASSIMILATION OF FREE NITROGEN 89 detailed investigations into the nutrition of the Leguminosae. That the Legu- minosae could grow in soil poor in nitrogen and thrive thereon, even without nitrogenous manuring, had long been known, and it has now been demon- strated that they take up nitrogen from the air (59) and convey it to the soil. This enrichment is particularly evident when the plants are ploughed in. All other plants, all our cereals and food crops, are, as regards the soil, merely consumers of nitrogen, since they are unable to take it up in any form but that of the nitrates of the soil. The difference is seen even in the amount of nitrogen present in the tissues of the two groups of plants. Lupine seeds contain 5-7 per cent. N, wheat grains only 2-1 per cent., lupine haulms 0-94 per cent., wheat straw only o-5 per cent. An experiment with peas showed that a quantity containing 16 mgr. of nitrogen gave rise to a crop containing 499 mgr., whilst the quantity of nitrogen in the 4 kilograms of mould they grew in had increased from 22 to 57 milligrams ; a total gain of 518 mgr. of nitrogen. Calculated for larger quantities of plants it will be at once seen that these figures represent an enormous profit. One hectare (=2-4 acres) of lupines is cal- culated to enrich the earth by 227 kilograms of nitrogen annually. The amount gained by the meteoric fixation of nitrogen (production of HNO, and HNO, during thunderstorms) would for the same area be only 0-09 to 1-8 kilogram per annum, so that there is no doubt that it is the atmosphere, and the atmosphere alone, from which these plants extract the gas. Seeing that no other cultivated plants* (not even Brassica alba, the White Mustard) are able to act in this way, we apparently have in the Legu- minosae a remarkable and unique group of organisms. But we shall be wrong if we attribute the power of fixing free nitrogen to the tissues of the plant itself. They are powerless to do this, and behave towards nitrogen in ‘no way differently from the tissues of non-leguminous plants. Not until they enter into partnership with certain bacteria, the dacteria of the root- nodules, do the plants act as usurers of nitrogen, gathering and storing it and growing ever richer. The nodules (60) which arise upon the roots of the seedling plants when they are a few weeks old are minute white or pinkish excrescences that soon increase in size and sometimes give the roots a distorted appearance, as though they were attacked by galls (Fig. 19, aand 6). At first hard and smooth, they become wrinkled as the foliage of the plant grows and, by the time the pods are ripe, are shrivelled and cracked. Their dried remains rot in the ground with the rest of the root. The nodules are either separate excrescences on the surface of the root, with whose vessels they are connected by a tiny strand of vascular fibres, or the root itself swells up in places. In both cases there is always'a close connexion between the cells of the nodule and the conductive tissue of the * The nodule-bearing alder and Elaeagnus are perhaps exceptions. go BACTERIA AND THE NITROGEN CYCLE plant (Fig. 19,0). Ifa transverse section of a young and firm nodule, which exudes a turbid milky juice on crushing, be examined, masses of large cells are seen, distinguished from those that surround them by being filled with a finely striate or punctate mass. Sometimes there are numerous small . nests of cells, sometimes they run together to form larger masses. These cells, which constitute what was formerly known as the ‘bacteroidal tissue’ (Fig. 19,4 and c), are nothing more or less than the enlarged cells of the root itself crammed full of fine, slender, rod-shaped bodies (Fig. 19d). The nature of these has been variously inter- preted. Woronin, the first observer (1866), took them to be bacteria-like parasites; other investigators since then have looked upon them as pro- teid crystals. If this view were correct we should have to regard the root- nodules not as pathological structures, but rather as a kind of nitrogenous potato with the albumen in the form of bacteroids. Recent investigations have, however, placed it beyond dis- pute that these rod-shaped bodies are bacteria, living and growing in the cells of the root (Fig. 19, c-f). The normal straight, rod-shaped bacteria, well tingible with anilin colours, are only found in the young nodules. As these grow older the bacteria take Fic. 19. Root-nodules of Leguminosae. a, root on all manner of distorted shapes ; nodule of the lupine, nat. size (from Woronin); 4, longitudinal section through a lupine root and nodale ; indle-shaped, branched, bifurcated £, fibro-vascular bundle of root ans off fine branches =e ped, 4 to every part of the nodule, and its bacteroidal tissue or inflated forms are common. It is to (w), low ae, from Woronin); c, a cell from a lupine odule filled with bacteria (black) between which the i i finer mime of the pretorlasm is ae. at the an les these deformed bacteria only (Fig. 19, of the cells intercellular ; from a section (fixed i i i ot cieels ert Inlae meies rues 2 se foaled 52 and /) that the term bacteroids is still degrcuieiorm: Cinsvriatetdsheniecvie @PPlied. They are so-called ‘involu- a pre niles ro OEE, Meee ON, ee ion forms,’ similar tothose found among many other species of bacteria when the conditions of growth are unfavourable (the acetic ferment, for instance, or the bacilli in old tubercle or diphtheria cultures). The cell contents as well as the shape are affected. They stain badly, and large numbers of the bacteroids seem to be mere empty shells. The conversion of the bacteria into bacteroids is, in short, nothing but a sign that the micro-organisms are dying and yielding up their protoplasmic contents to the plant, which begins to grow more vigorously as soon as the bacteroids appear. By the time the seed of the plant is ripe the shrunken empty nodules contain only fragments ROOT-NODULES OF LEGUMINOSAE gI of the bacteroids, together with a few intact healthy rods that remain in the soil and serve as seed material for next year’s nodules. Root-nodules have been found in all the sub-orders of the Leguminosae (Papilionaceae, Mimoseae, Caesalpineae), and they always contain bacteria and bacteroids. Root-nodules without bacteria do not exist, and since Legu- minosae destitute of nodules behave with regard to nitrogen just as other plants do, it seems evident that the bacteria are the nitrogen collectors. As an unproved hypothesis this idea was floating in the air for a long time, until the classical researches of Hellriegel and Wilfahrt (59) placed the matter beyond the reach of controversy. Their experiments proved that it was possible by planting sterilized seeds in sterilized earth to grow leguminous plants for some months without root-nodules, if they were well protected from subsequent infection. They showed further that such plants had lost the power of storing nitrogen, but regained it if the earth they grew in were inocu- lated with an infusion of soil whereon Leguminosae had previously flourished. Finally their researches brought to light the marked contrast between nitrogen-storers like Leguminosae, and nitrogen-consumers such as wheat or oats. The following table gives a few of the chief results of their investigations. Amount of Amount of | Gain or Loss Nitrogen in Nitrogen of Nitrogen seed and soil. in crop. in crop. I. NOT STERILIZED AND NOT INOCULATED: (a) Without nitrogenous manure Grammes. {| Grammes. | Grammes. Oats. é - is 7 . 0-027 0-007 ~ 0-020 Peas . : ‘ « 5 ‘ 0-041 1-283 + 1-242 (4) Manured with nitrate of calcium (N =o-112 grammes) Oats . 7 . . . . 0-139 0-09 - 0-049 Peas . 7 ‘ . F : 0-153 0-700 +0°547 II], INOCULATED WITH SOIL IN WHICH LEGU- MINOSAE HAD BEEN GROWN, NOT STERILIZED: (a) Without nitrogenous manure Oats . ; i . . ; 0-027 0-007 - 0:020 Peas 4. 6 “Ss oe oa 0-038 0-459 +0-421 (4) With nitrate of calcium (N =o0-112 grammes) Oats . és % ‘ é ‘ 0-139 0-088 ~ 0-051 Peas . ‘ * 3 é ‘ O-150 0-220 +0-070 III, INOCULATED AND STERILIZED: (a) Without nitrogenous manure Peas . ‘ ‘ - 5 . 0:038 O-O15 — 0:023 (6) With nitrate of calcium (N =o.112 grammes) Peas . . . . . . 0-045 O-014 - 0-031 92 BACTERIA AND THE NITROGEN CYCLE These tables explain themselves. It is clear that the pea nourishes itself in a similar manner to the oat when cultivated in sterilized soil and unable to form nodules (III), whereas under natural conditions it bears these prolifically and stores up nitrogen in large quantities. Furthermore, the tables show that, whilst oats are rendered much richer in nitrogen by suitable manuring (Id and II), peas are not affected (III); they cannot utilize nitrogen offered to them in this form. For oats, on the other hand, it is a matter of indifference whether the soil is sterilized or not, since they form no nodules. The advantage gained from non-nitrogenous manure, such as phosphate of potash, is shared equally by oats and peas. The next task was to obtain pure cultures of the bacteria of the root- nodules, and ascertain their behaviour towards atmospheric nitrogen. They are easy to cultivate on a decoction of leguminous plants to which } per cent. asparagin and 2 per cent. sugar has been added. In such a medium the bacteria grow well in the form of slender rods, aerobic and mobile, with a tendency to produce involution forms or bacteroids. They at first get their nitrogen from the asparagin, but after about two months’ growth every litre of the culture has gained from 9 to 18 milligrams of nitrogen which must necessarily have come from the atmosphere (Beyerinck). Mazé in similar experiments obtained an increase of 47-5 mgr. nitrogen in fifteen days, and in another case 23-4 mgr. in eighteen days, so that although further investigations are desirable there can be no doubt that pure cultures of the bacteria from root-nodules do actually assimilate and fix the nitrogen of the air (61). Morphologically the bacteria from different kinds of Leguminosae, whether in the nodules themselves or in pure culture, are very similar in appearance, and the growths on gelatine (which is not liquefied) are all of the same character. The ‘bacteroid’ forms are likewise of the same kind in all cases, so that it would seem as if all Leguminosae were inhabited by the same species of bacterium, to which the name Bacillus radicicola was given by Beyerinck and Rhizobium leguminosarum by Frank. But as soon as we investigate the action of these bacteria upon plants we find differences between them. If plants of clover, pea, and vetch growing in sterilized earth and destitute of root-nodules be watered with an infusion of bacteria derived from the root-nodules of peas, we find that numerous root-nodules arise both on the pea and on the vetch, whilst the clover forms very few or none at all. Conversely, clover bacteria are almost useless to the pea and the vetch. Nobbe and Hiltner (62) as a result of experiments, which although successful are not beyond criticism, have come to the conclusion that it is only between members of the same group of Papilionaceae that the bacteria of the root-nodules are exchangeable, that, for instance, clover bacteria can be used by other Trifolieae such as lucerne, but not by Phaseolus \upines SYMBIOSIS: PARASITISM 93 or other Phaseoleae or by Viciae such as Vicia, Ervum, or Pisum, the bacteria of these again being useless to Trifolieae. We should have, in fact, if these views be correct, different breeds of one and the same species of bacterium (B. radicicola), comparable to the different races of brewers’ yeasts or to those described by Eriksson in the wheat rust-fungus Puccinia. Nobbe and Hiltner have attempted to turn their improved theories to practical account by the introduction of ‘ Nitragin, a preparation manufac- tured at the Héchst Chemical Works. Nitragin is a pure culture on gelatine of bacteria from root-nodules—a kind of living manure to be mixed with the seed material or soil and strewn over the fields. There are eight different sorts of nitragin on the market, suitable for peas, lupines, beans, &c., and it is said to be very advantageous when first planting Leguminosae in virgin soil, or in soil of poor quality, moors for instance, or where for many years no Leguminosae have grown and the land is presumably destitute of nodule organisms. The results are extremely inconstant and frequently very difficult to judge, so that it is not surprising that opinions are divided as to its efficacy *. Instead of nitragin, ‘leguminous earth, i.e. soil in which Leguminosae thrive well, is sometimes used with advantage to ‘ inocu- late’ new ground and bad earth such as moorland. The remarkable association of bacteria with leguminous plants is generally re- garded as an instance of symbiosis, a : connexion from which both parties reap Fortis Maire teage a este aad pete advantage similar to the ‘ mutual’ associa- by in winch Ge ee tion of alga and fungus in lichens. Here, as icotepaen ee ee ee ee is well known, the green or brown cells of the alga are enclosed by the thickly matted filaments of the fungus (Fig. 20). The alga supplies the metatrophic fungus with organic compounds and the fungus repays the debt by providing the alga with the necessary moisture and mineral salts, not to speak of the protection that its embrace involves. This at least is the opinion of those who, following the ‘symbiotic’ tendency of the day, look upon a lichen as a co-operative concern. But it is more than doubtful whether this view is correct. All the algae that live in lichens are known to be able to live in a free state. They certainly do not need to be supplied by the fungus with water and mineral salts, and as regards protection it is difficult to see how the algal cells can be ‘ protected’ by hyphae which cling round them tightly and send ‘ suckers’ into their interior (Fig. 20, 6). The fungus behaves in every way as a parasite which lives upon * (See Dawson, FAi/. Trans. 1899, Vol. 192, pp. 1-28.] 94 BACTERIA AND THE NITROGEN CYCLE the alga. As a parasite it must establish a close connexion between its tissues and those of its host, and, since it cannot crawl into the alga as the tape-worm does into man, it winds its hyphae around the cells, Enclosed thus in the light, well-ventilated thallus of the fungus, the algae continue to live, but they draw no nourishment from it. The advantage is entirely on the side of the fungus, which is a true parasite. The association between the leguminous plants and the bacteria of their root-nodules, paradoxical as it appears at first sight, is of a precisely similar character; the plant is parasitic upon the micro-organism. To render this view more comprehensible, we will consider in detail the development of the nodules. The fine root-hairs of a young leguminous plant, destitute as yet of nodules, push themselves everywhere into the crannies between the particles of soil, taking up water and mineral salts and secreting fluids which dissolve and render assimilable the substances with which the cell-wall comes into contact. There can be no doubt that some of the secretions of the root-hairs act chemotactically upon many of the bacteria that swim in the water-filled crevices of the soil ; and these would be attracted furthermore by organic sub- stances issuing from wounds or scratches upon the root-hairs or upon the epi- dermis of the root. Asparagin, one of the most powerfully chemotactic com- : pounds known, is present in large Fic. 21. Invasion of leguminous roots by bacteria. quantities in the tissues of germinating a, Cell from the integument of root of the pea with Bs steam of tauisie sooges tha passes ea'aey Prants, and must necessarily escape sroottaroftepea;atnnginpartctectsann, Wherever the cell-walls are injured. Insidethe halt protoplasm mixed withbacteia whens ¢ #8 quite possible that this substance rot ay Oth & thin aca upward. ~ acts: asia ‘bait’ to attract the bacteria which would swarm into a torn root- hair just as they do into a capillary filled with asparagin (Fig. 21,4). There are reasons, too, for thinking that the plant facilitates the entrance of the micro-organisms by a softening of the cell-membrane of the root-hairs. This much is certain, that the bacteria are chemotactically attracted to the plant, and that, nourished by the organic substances offered to them, they multiply rapidly and force their way from the surface of the root inwards. Here again by softening its cell-walls the plant seems to smooth their path, and in thick columns the bacteria zoogloea* pushes on from cell to cell * The so-called ‘ infection-thread,’ first observed penetrating the root-hairs by Marshall Ward (see Phil. Trans. 1887, Vol. 178, p. 545). BIOLOGY OF THE ROOT-NODULES 95 into the inner tissues of the root (Fig. 21,¢ & 4). And now the plant begins visibly to react to the stimulus. Many of the cells of the root become larger, and carbohydrates and asparagin are brought down from the upper parts of the plant to be given unstintingly to the micro-organisms, whose accelerated growth and multiplication soon become manifest in the fast developing nodules. The root-nodules are nothing else than pure cultures of bacteria maintained by the plant for its own ends. The microbes, which grow at first at the expense of the tissues they live in, become before long more independent and draw their nitrogen from the atmosphere. Carbon they most likely obtain the whole summer through from the plant, which probably also secretes the ferment by which the starch is changed into assimilable sugar. The root-nodules are now in full activity, the bacteria in the cells absorbing nitrogen from the air in the intercellular spaces (63), and storing it up in their own bodies. But this state of exuberant vitality does not last. From overcrowding and other causes the multiplication of the bacteria becomes less rapid and bacteroids (involution forms) appear, a sign that the conditions of life are becoming less favourable. The plant asserts itself, and begins to absorb the substance of the bacterial cells, conveying the nitrogen from the root-nodules into the growing seeds. In the lupine at the time of flowering the nodules contain 5-2 per cent. N, which then becomes gradually less until, by the time the pods are ripe, only 1-7 per cent. is present. It is the nodules alone which yield up their nitrogen in this way, the amount contained in the other parts of the root remaining from first to last unchanged, namely about 1-6 per cent. The precise way in which the leguminous plant absorbs the bacterial cells is not clearly understood, but in all probability it dissolves them by means of a peptonizing enzyme. Only a remnant of the bacteria return to the soil when the root decays, the greater number are literally eaten up by the plant. To call this symbiosis is certainly a misapplication of the term*. The carbohydrates and asparagin that the plant offers the bacteria in the beginning are nothing but a usurer’s loan, for in the shape of valuable nitrogen they are demanded back again later on with heavy interest. Looked at from this standpoint, the view that the leguminous plant is parasitic on the bacteria no longer appears absurd. It is obliged to ‘ put itself outside ’ its hosts, just as the fungus is obliged to enclose the algae in the lichen thallus. But, whilst the lichen fungus is completely parasitic, the leguminous plant is only partly so. It only derives its nitrogen from its host, supplying its other needs (carbohydrates, mineral salts, &c.) in the same way as all ordinary plants, from which it differs indeed only in being unable * [It should be pointed out that the author's views of the relations between the organisms here and in the Lichens are not those accepted by botanists generally. See, for example, Pfeffer, Physiology of Plants, Vol. 1, Engl. ed., pp. 364 and 371.] 96 BACTERIA AND' THE NITROGEN. CYCLE to assimilate nitrogen from the nitrates in the soil. The table (III) on p. 91 shows this very clearly. In this semi-parasitic mode of life the Leguminosae resemble the Rhinanthaceae, Thesium, and some other green plants, of which the roots graft themselves on to the roots of adjacent plants of other species. These function as hosts, but it is not known what substances they yield up to their parasites. Since it is evident that the soil of every field in which Leguminosae grow, and probably indeed soil of all kinds, contains the bacteria of root- nodules, attempts have naturally been made to obtain them direct from the soil. Up till now these experiments have not been attended with success, nor is it known whether the bacteria live and multiply in the soil, or whether they exist merely in the form of spores (as yet unknown) which are quickened into life by contact with the roots of leguminous plants. But although it has been hitherto impossible to isolate the bacteria of root-nodules from soil, Winogradsky has discovered another soil bacterium which fixes atmospheric nitrogen (64). It has been named Clostridium Pasteurianum, and belongs to the group of butyric ferments. It can be isolated in a nutritive solution containing sugar (as a source of carbon) and mineral salts, nitrates or other nitrogen compounds being of course rigidly excluded. The sugar is broken up into butyric, acetic, and carbonic acid, and hydrogen, besides some by-products of uncertain composition, and at the same time nitrogen is taken from the atmosphere and stored up in the body of the cells. The more sugar there is present (i.e. the more energetic the fermentation), the greater is the amount of nitrogen taken up, as the following figures show: Dextrose in nutritive N. in nutritive N. in the crop solution. solution. after fermentation. Grammes. Milligrammes. I fo) 3:0 2 {o) 2-9 3 ° 8-1 6 fo) 12-8 Possibly the nitrogen is fixed by nascent hydrogen, and ammonia formed as the first product. The bacterium in pure culture is an anaerobic actively motile bacillus which grows in slimy masses. It is considerably different in appearance from the bacteria of root-nodules, becoming spindle- shaped during sporulation (hence the name Clostridium) and, like other butyric bacteria, it stains blue with iodine. What the conditions are under which Clostridium Pasteurianum exists in nature, and whence it obtains its carbon, is unknown. Should sugar be a necessity it could not grow in unmanured soil, but might occur in situa- tions where the processes of fermentation and putrefaction give rise to a variety of organic compounds. NITROGEN-FIXING BACTERIA 97 It is not known whether other butyric organisms are also able to fix atmospheric nitrogen, but presumably other, perhaps prototrophic, bacteria of the soil do so. It is highly probable that we shall find such in forests where the earth is never ‘manured’ and where, notwithstanding, enormous quantities of nitrogen are fixed and worked up into the living substance of plants. But all researches in this direction must be received very critically, for there can be no doubt that the idea now very common in agricultural circles that a// soil bacteria can assimilate free nitrogen is quite incorrect. Green and blue-green algae were formerly supposed to be able to do so, but this opinion is now held to be incorrect (65), and although it is stated that mould-fungi can fix free nitrogen the experiments on which the state- ment is based did not take into consideration all the possible sources of error. The time will perhaps come when ‘Nitragin’ will be replaced by pure cultures of free-living, nitrogen-fixing bacteria, which will be ‘sown’ so as to alternate with nitrogen-consuming crops. FISCHER H CHAPTER XI BACTERIA AND THE CIRCULATION OF NITROGEN (Continued) 2. The Liberation of Organic Nitrogen by Putrefaction, and its Mineralization by the Nitrifying Bacteria. ONE of the most conspicuous physiological differences between plants and animals is the absence in plants of any xitrogen-containing excretions. Nitrogen, once assimilated by the plant, is built up into proteids, alkaloids, colouring-matters (chlorophyll, indigo), and other compounds, but as long as the plant lives is not excreted. It is set into circulation again only by the death and decay of the tissues, for the living plant can be used as a source of nitrogen only by parasites and by plant-eating animals, In the animal body nitrogen is present chiefly in the form of proteids and their derivatives the albuminoids, e.g. mucin, glutin, keratin, elastin, as well as other highly complex bodies such as lecithin, haemoglobin, chilin, and nuclein. In the animal, as in the plant, the nitrogen of these substances is set free at death, but, in addition, the animal, unlike the plant, gives off in its secretions (milk) and excretions (dung, urine) a number of nitrogenous compounds. It is to these substances, enriched still more by the nitrogen contained in straw, that stable-manure owes its high value as a fertilizer for plants. But the nitrogen in fresh stable-manure is in a form that is useless to plants; they cannot assimilate it. In the urine of herbivora nitrogen is present mainly as hippuric acid, in human urine mainly as urea and uric acid. In the excrements it is contained in the remnants of undigested nitrogenous food, and the products of decomposition set up by the bacteria of the intestine. These products include indol, skatol, leucin, tyrosin, and many simpler nitrogen compounds even down to ammonia. But none of these, not even ammonia, are directly available as nutritive materials for green plants. Not until the nitrogen has been removed from the organic molecule by the process of putrefaction, and has been united to a mineral base by the process of nitrification, can it be taken up by the green plant. PUTREFACTION 99 Through the tissues of green plants all organic nitrogen must, however, sooner or later, circulate. Putrefaction is a purely biochemical process, and can only take place when the fundamental conditions for all vital action are fulfilled. Ifthe temperature sink below a certain point, organic substances cannot putrefy, as was well shown by the frozen Siberian mammoths. When discovered, their flesh was so little changed that it was eaten by the hunters’ dogs ; yet it must have lain in Nature’s refrigators for countless centuries. Absence of moisture acts in the same way as absence of warmth. Dry meat does not putrefy. Dryness and a low temperature together will preserve organic matter for any length of time, as is well illustrated by the undecayed yet unembalmed bodies that have been kept for centuries in the vaults of certain churches. Other means of preservation by chemical and physical agencies have been already referred to, but in all methods the funda- mental principle is the same, namely, to create such conditions that bacteria cannot live; for putrefaction—the splitting-up of the nitrogenous con- stituents of organic matter—is the work of bacteria, and of bacteria alone. The flesh of fruits, being poor in nitrogen and rich in organic acids, is not attacked by bacteria. The rotting of pears, grapes, oranges, and other fruits of a like character, is brought about principally by mould-fungi (66) (Penicillium, Mucor, Botrytis). The decomposition of dead animal bodies, of vegetable tissues, or of substances like stable-manure, is far from being a simple putrefactive process. Side by side with the disintegration of nitrogenous bodies there are going on a number of fermentative changes by which oz-xitrogenous compounds are being broken up, besides nitrification and other biochemical processes. For this reason it is always difficult, and often impossible, to determine the respective parts played by the different species of bacteria. Putrefactive processes are going on in all places where nitrogenous organic matter is under suitable conditions of temperature and moisture, manure heaps for instance, cesspools, the muddy bottoms of lakes and rivers, and the ocean. floor. Proteids are split up by putrefaction into a large number of simpler compounds both nitrogenous and non-nitrogenous. The substances thus produced are precisely similar to those resulting from the artificial decom- position of proteids by fusion with caustic potash, or boiling with hydro- chloric acid or barium hydrate. Five groups may be distinguished : 1. Albumoses and pepitones: soluble diffusible bodies closely resembling albumen. They are produced by the action on albumen of bacterial enzymes similar to the enzymes (pepsin and pancreatin) which give rise to peptones in the digestive tract of man. 2. Aromatic compounds: among others indol and skatol which give the characteristic odour to human excrement; also some non-nitrogenous substances such as phenol, phenylacetic acid, and phenylpropionic acid. 3. Amido compounds, all nitrogenous ; leucin, tyrosin, aspartic acid, glycocol. Hg 100 BACTERIA AND THE NITROGEN CYCLE 4. Fatty and aromatic acids, all non-nitrogenous and therefore having no part in the circulation of nitrogen ; acetic, butyric, succinic, and valerianic acids. 5. Jnorganic end-products of putrefaction: free nitrogen, ammonia, free hydrogen, methane, carbonic acid, methylmercaptan, sulphuretted hydrogen. It is probable also, but*not certain, that phosphuretted hydrogen is formed and is oxidized at once by the free oxygen of the atmosphere. Most of these substances are formed also by the chemical decomposition of proteids, but there is a sixth group which may be termed specific putrefac- tive products. These are the so-called ptomaines or putrefactive alkaloids (67). They are nitrogenous compounds (amine-bases), but although a large number have been described they are, in consequence of the difficulty of preparing them, still only imperfectly known. From putrid flesh (mammalian, including human), fish, and gelatine Brieger isolated neuridine (C, Hy, No), trimethylamine (C,H,N), cadaverine (pentamethylendiamine, C; H,, N,), and putrescine, a diamine of the methylene series (C,H,,N,). These are all of them either not poisonous or only poisonous in large doses. Other ptomaines, derived from putrid foods of various kinds (sausages, cheese), are highly toxic (Plomatropine, Tyrotoxine). The name toxine was formerly used for the amine bases only, but it is now applied indiscriminately to all bacterial poisons irrespectively of their chemical constitution. (See also Ch. XVII.) As far as the circulation of nitrogen is concerned, we have to consider only the end-products of putrefaction, free nitrogen and ammonia. All the more complex intermediate bodies are broken down finally to these. Leucin, for instance, splits up into valeric acid, ammonia, carbonic acid, and free hydrogen. Tyrosin yields by aerobic putrefaction hydroparacumaric acid, paraoxyphenylacetic acid, paracresol, phenol, ammonia, and carbonic acid. By anaerobic putrefaction it gives rise to indol, carbonic acid, and hydrogen. The phenomena of putrefaction are so complicated that we do not know all of the compounds that arise during the process. The course it runs is, however, greatly modified by the presence of oxygen (68). This list of putrefactive products is far from being complete, for even the qualitative investigation of the processes is still unfinished ; quantitative analyses are at present impossible. We do not know for instance what determines the predominance of one or the other intermediate product. The effects of the presence of oxygen are somewhat better understood (68). If air have free access, putrefaction may go on without any odour at all, the evil-smelling gases (NH, and SH, for example) being oxidized at once to form nitrates and sulphates. Aerobic bacteria too, such as the nitre and sulphur bacteria, bring about this mineralization of organic nitrogen. Moreover, when air is circulating freely, there is no accumulation of intermediate products such as skatol or indol. To this kind of aerobic decomposition, proceeding without offensive smell, the term ‘decay’ may be applied as distinguished from ‘ putrefaction.’ It occurs on the surface of manure-heaps, on the outer surface of carcases, and in well-ventilated soil. PUTREFACTION IOI In anaerobic decomposition (putrefaction proper), as in anaerobic fer- mentation, the organic molecules are at first only partly disintegrated, inter- mediate products such as leucine, tyrosine, skatol, and indol being formed. In the absence of air these accumulate, and hence it is that the putrefaction going on in the mud of ponds or ditches, or inside carcases, is accompanied by such evil odours. Although the details of the process vary considerably according to the presence or absence of air, the ultimate products of putrefaction are in both cases the same: namely, free nitrogen, free hydrogen, ammonia, methane, carbonic acid, and sulphuretted hydrogen. These also are the end-results of the disintegration of the human body. The decomposition of plant tissues, poor in nitrogen but containing large quantities of cellulose, gives rise to humin compounds. There can be no doubt that it is a biochemical process, but the nature and functions of the bacteria concerned in it have not yet been carefully studied (69). One of the bacteria which was formerly looked upon as a putrefactive organism par excellence was the Bacterium termo. Cohn described under this name a short, oval, actively motile bacillus, slightly fluorescent in cultures (Fig. 22, a). The species is, however, no longer to be identified, for his description would apply to several common forms. Asa matter of fact there are many bacteria going by this name which is properly only applicable as a collective designation for motile bacteria in putrescible substrata. In the rich bacterial flora of a putrescent fluid (70) two distinct biological groups must be distinguished, the saprogenic and the saprophile. To desig- nate all bacteria living upon dead organic matter as saprophytes is insuffi- cient. As we have already seen, the saprogenic bacteria are able, by the chemical ferments they secrete, to break up the molecules of proteids. The saprophile organisms cannot do this, but they find a rich supply of nutri- ment in the products thus formed.