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fflSTORICAL  AND  PRESENT  DAY 
PERSPECTIVES  ON  FISH  POPULATIONS 
IN  THE  ROCK  CREEK  DRAINAGE  IN 
- WEST  CENTRAL  MONTANA,  1971  -2004 


By:  Rodney  K.  Berg 
Fisheries  Biologist 
Montana  Fish,  Wildlife  & Parks 


Federal  Aid 

Project  Number:  F- 1 1 3-Rl 

F-113-R2 

Project  Title:  Statewide  Fisheries 
Management 

Job  Title:  Rock  Creek  Drainage 
Fisheries  Management 
Date:  May,  2004 


ABSTRACT 


Rock  Creek  has  historically  provided  one  of  the  most  important  blue  ribbon  trout  fisheries 
in  Montana.  Rainbow  trout  provided  the  bulk  of  the  fishery  until  recent  years.  Chronic  low 
flows,  elevated  water  temperature  and  whirling  disease  have  reduced  rainbow  trout  density  by 
over  80  percent  since  1993,  while  brown  trout  have  increased  substantially  in  density.  Westslope 
cutthroat  and  bull  trout  densities  have  also  declined  significantly  since  peaks  observed  in  the  early 
1980's.  Historic  estimates  for  a 33  year  period  of  record,  1971  through  2004,  are  presented. 
Summer  recruitment  and  winter  mortality  of  rainbow  trout  and  the  status  of  whirling  disease  in 
the  drainage  are  discussed. 

Bull  trout  redd  counts  conducted  fi'om  1 993  to  2003  in  six  critical  spawning  tributaries 
peaked  in  1998  and  have  generally  declined  since  then.  Reduced  redd  counts  appear  to  be 
correlated  with  reduced  stream  flow  in  the  spawning  tributaries.  Management  recommendations 
for  an  adfluvial  bull  trout  population  in  East  Fork  Rock  Creek  Reservoir,  imperiled  by  poor 
spawning  success  and  loss  of  fish  to  an  irrigation  diversion,  are  discussed. 


-1- 


INTRODUCTION 


A basic  inventory  is  essential  in  formulating  management  plans  for  maintaining  and 
utilizing  a fishery.  Seldom  is  this  information  complete  for  an  entire  area  or  drainage.  Streams 
and  lakes  in  the  Rock  Creek  drainage  in  west  central  Montana  support  one  of  the  most  significant 
and  heavily  utilized  sport  fisheries  in  the  region  and  state. 

Inereasing  human  inhabitation  and  eneroachment  on  lands  adjacent  to  streams,  and 
inereasing  fishing  and  recreational  use  of  streams  in  the  Rock  Creek  drainage  provide  increasing 
ehallenges  to  effective  management  of  the  blue  ribbon  trout  fishery  in  this  drainage. 
Environmental  changes  in  the  1 990's,  including  low  stream  flows  associated  with  chronic  drought 
and  the  introduetion  and  spread  of  whirling  disease,  have  also  increased  the  need  for  better 
information  to  meet  management  challenges. 


DESCRIPTION  OF  STUDY  AREA 

The  Rock  Creek  drainage  lies  in  west  eentral  Montana,  and  is  a principal  tributary  of  the 
Clark  Fork  River.  It  enters  the  Clark  Fork  River  about  25  irdles  upstream  of  Missoula,  Montana. 


TECHNIQUES 


Electrofishing 

Fish  were  sampled  in  streams  in  the  drainage  using  direct  current  electrofishing.  Boom- 
suspended  or  mobile  electrofishing  apparatus  carried  in  water  craft  were  used  on  larger  streams. 
Baekpack  electrofishing  systems  were  used  on  smaller  streams. 

Gill  Nets 

Fish  were  sampled  in  lakes  in  the  drainage  using  standard  “Montana”  experimental  floating 
and  sinking  nylon  or  monofilament  gill  nets  6 x 125  ft.  with  graduated  mesh  size  from  3/4  to  2 
inches  square  measure.  Overnight  stationary  sets  with  these  nets  generally  produced  good 
catches  of  a wide  variety  of  fish  species.  The  nets  were  equally  distributed  around  the  entire 
perimeter  of  each  lake  to  produce  a representative  catch.  The  locations  of  each  gill  net  set  were 
marked  on  USGS  topographic  maps.  In  addition,  GPS  coordinates  for  each  gill  net  set  were 
recorded  for  future  reference. 

Fish  Sample  Processing  and  Tagging 

Sampled  fish  were  measured  to  the  nearest  millimeter  in  total  length,  and  weighed  to  the 
nearest  1 0 grams.  Sex  and  spawning  condition  (gravid,  ripe  or  spawned)  were  recorded  for  fish 
captured  during  their  spawning  period. 

Fish  population  estimates  were  made  using  the  log  likelihood  method  ineorporated  in 
Version  4 of  the  Montana  Fish,  Wildlife  and  Parks  program.  Captured  fish  were  marked  with  fin 
cHps  or  punches  and  reeaptured  after  marked  fish  redistributed  into  the  population  for  one  to  two 
weeks. 


-2- 


Digitized  by  the  Internet  Archive 
in  2017  with  funding  from 
Montana  State  Library 


https://archive.org/details/historicalpresen2004berg 


FINDINGS,  RESULTS  AND  DISCUSSION 


Mainstem  Rock  Creek  Fish  Populations 

Rock  Creek  has  historically  provided  one  of  the  most  important  blue  ribbon  trout  fisheries 
in  Montana.  Angler  interest  and  fishing  pressure  has  steadily  increased  over  the  past  half  century. 

The  highest  angling  interest  and  fishing  pressure  has  always  occurred  on  the  lower  40  to 
50  rmles  of  the  mainstem  of  Rock  Creek.  This  reach  of  stream  is  floatable  by  water  craft  during 
high  water.  In  addition,  the  famous  salmon  fly  hatch  occurs  each  year  in  this  area  during  late 
spring  to  early  summer. 

For  these  reasons,  trout  populations  have  been  estimated  by  electrofishing  in  Rock  Creek 
for  a longer  period  of  record  than  in  any  other  stream  in  west  central  Montana.  Trout  population 
estimates  were  initiated  by  then  Montana  Fish  and  Game  biologist,  Ron  Marcoux,  in  September, 
1971,  in  the  Fish  and  Game  Section,  13.8  miles  upstream  from  the  mouth.  The  following  fall, 
Marcoux  initiated  estimates  in  the  Hogback  Section,  30.6  miles  upstream  from  the  mouth. 

During  this  report  period  aU  past  trout  population  estimates  in  these  sections  were 
standardized  to  a common  estimator,  the  log  likelihood  estimator,  incorporated  in  Version  4 of 
the  Montana  Fish,  Wildlife  and  Parks  fish  population  estimate  program.  AU  data  were 
keypunched  and  analyzed  by  a common  observer  to  eliminate  estimate  variance  due  to  a variety  of 
past  estimator  methods  and  observers. 

Since  the  inception  of  electro  fishing  in  1971,  18  rainbow  trout  population  estimates  have 
been  made  in  the  Hogback  Section  and  24  have  been  made  in  the  Fish  and  Game  Section  (Tables 
1 and  2).  This  includes  the  most  recent  estimates  which  were  made  in  each  section  in  Spring, 
2004.  Due  to  lower  densities,  brown,  westslope  cutthroat  and  buU  trout  have  been  successfully 
estimated  on  fewer  occasions. 

Findings  reveal  rainbow  trout  have  provided  the  bulk  of  the  sport  fishery  in  Rock  Creek 
until  recent  years.  Hatchery  rainbow  trout  were  planted  in  Rock  Creek  through  1972.  FoUowing 
suspension  of  hatchery  supplementation,  wUd  and  total  rainbow  trout  densities  probably  increased 
significantly  in  Rock  Creek.  Even  though  baseline  data  prior  to  1 972  are  lacking  for  Rock  Creek, 
monitoring  of  other  streams  in  Montana  consistently  showed  significant  increases  in  rainbow  trout 
densities  foUowing  suspension  of  hatchery  planting. 

Although  trout  population  estimates  obtained  on  Rock  creek  in  the  1970's  meet  minimum 
acceptable  criteria,  in  terms  of  numbers  of  recaptured  fish  required  to  project  a vahd  estimate,  the 
1970's  data  should  probably  be  viewed  with  skepticism  due  to  primitive  electro  fishing  gear 
employed  during  that  time  period.  Electro  fishing  currents  used  in  the  1970's  included  alternating 
and  pulsed  direct  current  outputs,  which  presently  are  known  to  cause  fish  injury,  movement  and 
mortahty.  If  mortahty  or  movement  of  marked  fish  occurs  between  mark  and  recapture  runs, 
assumptions  for  a valid  estimate  are  violated,  and  resulting  estimates  are  invahd  and  inflated.  It 
appears  several  1970's  estimates  in  Rock  Creek  are  invahd  and  inflated  due  to  this  factor. 


-3- 


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Table  1.  Trout  per  mile  estimates  in  the  Fish  and  Game  Section,  Rock  Creek,  1971  - 2004  (Catchable  > 6.0",  Large  > 13.0"  TL). 


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248 

211 

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135 

383 

383 

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558 

634 

Large 

299 

90 

52 

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57 

82 

98 

233 

500 

230 

555 

344 

330 

186 

57 

Catchable 

1,184 

2,626 

800 

462 

2,141 

1,672 

1,612 

376 

1,673 

637 

1,348 

1,066 

784 

920 

495 

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1972 

1973 

1978 

1979 

1979 

1980 

1980 

1981 

1981 

1982 

1982 

1986 

1986 

1989 

1993 

1996 

2001 

2004 

-5- 


By  the  1980's  electro  fishing  methods  began  to  employ  continuous  direct  current  reducing 
electrofishing  injuries,  mortahty  and  movement.  For  this  reason,  trout  population  discussions  in 
this  report  are  confined  to  estimates  obtained  after  1980. 

Rainbow  Trout 

Most  historic  and  all  recent  trout  population  estimates  in  Rock  Creek  have  been  made  in 
the  spring.  Between  1980  and  1993,  catchable  rainbow  trout  spring  densities  in  the  Fish  and 
Game  Section  of  Rock  Creek  were  remarkably  consistent  varying  Ifom  1,314  to  1,548  fish  per 
mile  (Figure  1).  Between  1993  and  1996  and  continuing  through  2004,  catchable  rainbow  trout 
declined  precipitously  in  the  Fish  and  Game  Section.  Catchable  rainbow  declined  tfom  an  average 
density  of  about  1,500  fish  per  mile  between  1980  and  1993  to  263  fish  per  mile  in  2004,  or  by  82 
percent. 

In  the  Hogback  Section,  catchable  rainbow  trout  spring  densities  varied  from  1,672  to  376 
fish  per  mile,  averaging  about  1,000  fish  per  mile,  between  1980  and  1993  (Figure  2).  Catchable 
rainbow  declined  from  a recent  peak  spring  density  of  1 ,066  fish  per  mile  in  1 986  to  1 1 5 fish  per 
mile  in  2004,  or  by  89  percent.  Large  rainbow  declined  from  555  fish  per  rmle  in  1989  to  57  fish 
per  nfrle  in  2004,  or,  also,  by  89  percent.  Explanations  for  these  dramatic  declines  will  be 
presented  later  in  this  report. 

Since  1980,  spring  and  fall  estimates  for  rainbow  trout  were  obtained  in  four  different 
years,  1980,  1981,  1982  and  1986,  in  the  Fish  and  Game  Section.  In  each  of  these  four  years, 
catchable  rainbow  trout  population  densities  increased  between  spring  and  fall.  Density  increases 
ranged  form  4 percent  in  1980  to  68  percent  in  1986.  In  healthy  trout  populations  which  are  not 
over  exploited  by  angling,  catchable  trout  population  increases  should  be  expected  between  spring 
and  fall  due  to  fish  growth  during  this  time  period.  This  is  often  referred  to  as  summer 
recruitment. 

Large  rainbow  trout,  greater  than  or  equal  to  1 3 inches  in  total  length,  increased  between 
spring  and  fall  by  158  percent  in  1981  and  5 percent  in  1986  but  decreased  by  27  percent  in  1980 
and  36  percent  in  1982.  This  indicates  large  rainbow  were  over  exploited  or  moved  from  the 
section  between  spring  and  fall  in  1980  and  1982. 

Also,  since  1980,  spring  and  fall  estimates  for  rainbow  trout  were  obtained  in  four 
different  years,  1980,  1981,  1982  and  1986,  in  the  Hogback  Section.  In  1980,  catchable  and  large 
rainbow  densities  decreased  between  spring  and  fall  by  4 and  56  percent,  respectively.  In  1981, 
catchable  and  large  rainbow  increased  between  spring  and  fall  by  345  and  20  percent.  In  1982, 
catchable  rainbow  increased  by  1 12  percent  between  spring  and  fall  while  large  rainbow  decreased 
by  48  percent.  In  1986,  catchable  and  large  rainbow  decreased  by  26  and  54  percent, 
respectively,  between  spring  and  fall.  These  findings  indicate  catchable  and  large  rainbow  were 
often  over  exploited  or  moved  from  the  Hogback  Section  between  spring  and  fall. 

In  aU  trout  populations,  some  decrease  in  catchable  and  large  trout  densities  is  expected 
between  fall  and  spring  due  to  winter  mortality.  On  two  occasions,  between  fall  and  spring,  1980- 
81  and  1981-82,  estimates  are  available  to  measure  winter  trout  mortahty  on  Rock  Creek. 


-6- 


-7- 


Figure  1.  Catchable  spring  rainbow  trout  density  estimates  in  the  Fish  and  Game  Section 
Rock  Creek,  1972  - 2004. 


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Findings  reveal  catchable  rainbow  trout  winter  mortality  of  2 percent  in  1980-81  and  46  percent 
in  1981-82  in  the  Fish  and  Game  Section.  In  the  Hogback  Section  catchable  rainbow  trout  winter 
mortality  amounted  to  77  percent  in  1980-81  and  62  percent  in  1981-82.  Large  rainbow  densities 
decreased  between  fall  and  spring  by  6 percent  in  1980-81  but  increased  by  3 percent  in  1981-82 
in  the  Fish  and  Game  Section,  indicating  winter  mortality  was  more  than  offset  by  movement  of 
spring  spawning  rainbows  into  the  section.  Large  rainbow  trout  densities  increased  between  fall 
and  spring  by  44  percent  in  1980-81  and  138  percent  in  1981-82  in  the  Hogback  Section 
indicating  a more  significant  movement  of  spawning  fish  into  this  section. 

Implications  of  these  observations  with  regard  to  validity  of  spring  estimates  for  rainbow 
in  Rock  Creek  are  significant.  Since  1989,  or  for  the  past  15  years,  only  spring  estimates  have 
been  made  on  Rock  Creek  due  to  low  water  navigability  difficulties  and  increased  angler  conflicts 
(i.e.:  increased  fishing  pressure)  in  the  fall.  Since  fall  estimates  seem  to  be  precluded  for  these 
reasons  and  since  rainbow  trout,  a spring  spawner,  have  decreased  significantly  in  density  while 
brown  trout,  a fall  spawner,  have  increased,  spring  estimates  should  be  continued.  However, 
marking  and  recapture  electrofishing  runs  should  be  standardized  to  the  same  time  each  spring  to 
minimize  estimate  error  and  variability  attributable  to  rainbow  trout  spring  movement. 

Brown  Trout 

In  contrast  to  declining  densities  of  rambow  trout,  brown  trout  have  increased  m density  m 
the  Hogback  and  Fish  and  Game  Sections.  (Figure  3).  Successful  estimates  of  large  brown  trout 
have  been  made  smce  1989  in  both  the  Hogback  and  Fish  and  Game  Sections. 

In  the  Hogback  Section,  large  brown  trout,  greater  than  or  equal  to  1 3 inches  in  total 
length,  increased  from  46  fish  per  mile  in  1989  to  383  fish  per  mile  in  2004,  or  by  733  percent.  In 
the  Fish  and  Game  Section,  large  brown  trout  increased  from  76  to  342  fish  per  mile,  or  by  350 
percent,  between  1989  and  2004.  By  2001  and  2004,  large  brown  trout  outnumbered  large 
rambow  trout  in  the  Hogback  and  Fish  and  Game  Sections,  respectively.  Recent  catchable  brown 
trout  estimates  could  not  be  made  until  2001  in  the  Hogback  Section  and  2004  in  the  Fish  and 
Game  Section.  In  2004,  634  catchable  brown  trout  were  observed  in  the  Hogback  Section 
compared  to  655  in  the  Fish  and  Game  Section. 

Total  large  trout  density  has  essentially  remained  stable  in  the  Hogback  and  Fish  and 
Game  Sections  due  to  replacement  of  large  rainbow  trout  by  large  brown  trout  (Figure  3). 
However,  total  catchable  trout  densities  have  declined  from  an  average  of  about  1,000  fish  per 
mile  between  1980  and  1993  to  634  fish  per  mile  in  2004,  or  by  37  percent,  in  the  Hogback 
Section  (Table  2).  In  the  Fish  and  Game  Section,  total  catchable  trout  densities  declined  from  an 
average  of  about  1,500  fish  per  mile  between  1980  and  1993  to  918  fish  per  mile  in  2004,  or  by 
39  percent  (Table  1). 

Replacements  of  large  rainbow  trout  by  large  brown  trout  indicates  adult  brown  trout 
have  pioneered  vacant  space  left  due  to  declining  densities  of  large  rainbow  trout  in  both  sections. 
Catchable  brown  trout,  estimable  in  2001  and  2004  in  the  Hogback  Section  and  in  2004  in  the 
Fish  and  Game  Section,  will  probably  continue  to  increase  in  density.  Earlier  pioneering  in  the 
Hogback  Section,  30.6  miles  upstream  from  the  mouth,  than  in  the  Fish  and  Game  Section,  13.8 


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Figu  re  3.  Large  rainbow  and  brown  trout  spring  density  estimates  in  the  Hogback  and 
Fish  and  Game  Sections,  Rock  Creek,  1977  - 2004. 


-10- 


miles  upstream  from  the  mouth  , indicates  pioneering  of  brown  trout  is  probably  occurring  due  to 
downstream  rather  than  upstream  movement  of  fish. 

Westslope  Cutthroat  Trout 

Westslope  cutthroat  trout  are  a species  of  special  concern  in  Montana  due  to  declining 
distribution  and  numbers  in  some  parts  of  their  range.  In  Rock  Creek  catchable  westslope  trout 
were  not  found  in  estimable  numbers  untU  after  restrictive  fishing  regulations  were  implemented  in 
May,  1979.  Following  implementation  of  restrictive  regulations,  which,  in  part,  reduced  the  daily 
limit  of  trout  from  ten  fish  to  three  fish,  westslope  cutthroat  trout  estimates  were  obtained  for  the 
first  and  only  time  in  fall,  1981,  in  the  Fish  and  Game  Section  at  a density  of  1 1 catchable  fish  per 
mile  (Table  1).  In  the  Hogback  Section,  westslope  cutthroat  estimates  have  been  obtained 
sporadically,  in  seven  different  years  between  1979  and  2004  (Table  2).  Catchable  cutthroat 
densities  in  this  section  have  ranged  from  33  fish  per  mile  in  fall,  1979,  to  376  fish  per  mile  in  fall, 
1982.  Explanations  for  the  increase  in  cutthroat  densities  after  1979  and  their  demise  after  1982 
win  be  presented  later  in  this  report. 


Bull  Trout 

Bull  trout  were  generally  found  in  estimable  numbers  from  1980  to  1986  in  the  Fish  and 
Game  Section  and  from  1980  to  1993  in  the  Hogback  Section  (Tables  1 and  2).  Estimates  of  bull 
trout  densities  obtained  prior  to  1980,  may  not  be  valid  due  to  primitive  electro  fishing  gear  which 
probably  caused  fish  movement  and  mortality,  violating  assumptions  of  a vahd  estimate. 
Explanations  for  the  decline  in  bull  trout  densities  in  Rock  Creek  will  be  presented  later  in  this 
report.  The  highest  densities  of  catchable  bull  trout  since  1 980  were  317  fish  per  mile  in  spring, 
1982,  in  the  Fish  and  Game  Section  and  187  fish  per  mile  in  spring,  1981,  in  the  Hogback  Section. 


Stream  Flow 

Stream  flow  has  been  monitored  in  Rock  Creek  near  its  confluence  with  the  Clark  Fork 
River  for  a 31  year  period  of  record  from  October  1,  1972,  to  September  30,  2003,  by  the  U.S. 
Geological  Survey  (USGS).  USGS  data  indicate  chronic  low  mean  dally  stream  flows  of  less  than 
90  cubic  ft.  per  sec.  (cfs)  have  been  observed  in  10  of  the  past  17  years  between  1987  and  2003 
(Figure  4).  Prior  to  1987  mean  daily  stream  flows  of  less  than  90  cfs  were  observed  in  only  two 
of  14  years. 


Water  Temperature 


Water  temperature  in  Rock  Creek  near  the  mouth  was  monitored  during  a 3 year  period. 
May  - August,  1972-1974,  by  U.  S.  Forest  Service  (USFS).  USGS  monitored  water  temperature 
during  a 3 year  period.  May  - August,  1980-1982,  and  during  a 7 year  period.  May  - August, 

1 995  - 200 1 . Although  not  conclusive  due  to  some  data  uncertainties,  this  monitoring  suggests  a 
warming  trend  in  Rock  Creek  over  the  last  three  decades  (Shane  Hendrickson,  USFS,  2003, 
personal  communication).  The  means  of  daily  maximum  water  temperatures  from  May  through 


-11- 


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EXPLRHRTIOH 

DRILY  HERN  STRERHFLOH  X HERSURED  STRERHFLOH  ESTIHRTED  STRERHFLOH 


Figu  re  4.  Daily  mean  stream  flow  measured  at  the  USGS  gage  station,  lower  Rock  Creek, 
10/01/1972  - 9/30/2003. 


-12- 


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August  have  increased  from  about  15.5  degrees  C (60  degrees  F)  in  1972  to  about  20  degrees  C 
(68  degrees  F)  in  2001  (Figure  5).  USFS  regression  analysis  indicates  this  increase  is  statistically 
highly  significant. 


Whirling  Disease 

Sentinel  cage  studies  of  rainbow  trout  at  thirty  locations  in  the  Rock  Creek  Drainage, 
1998-2003,  indicate  whirling  disease  was  present  in  the  drainage  at  the  onset  of  testing  in  1998 
(Bill  Granath,  University  of  Montana,  2004,  personal  communication).  By  2003,  caged  rainbow 
tested  positive  for  M.  cerebralis.  or  whirling  disease,  at  24  of  30,  or  80  percent,  of  the  study  sites 
in  the  drainage  (Figure  6).  Only  6 of  30  sites  tested  negative  (0%  infection  rates)  for  M 
cerebralis.  including  three  test  sites  on  the  Upper  Middle  Fork  of  Rock  Creek  and  one  test  site 
each  on  lower  Spring,  Ranch  and  Hogback  Creeks. 

In  addition  to  being  pervasive  throughout  the  drainage,  average  grades  of  infection 
(AGFs)  are  disturbingly  high,  averaging  2.5  or  higher  in  82  percent  of  the  sites  tested  in  2002,  the 
most  recent  year  for  which  fuU  data  analysis  is  available  (Table  3).  AGFs  are  based  on  the 
original  MacConnell-Baldwin  Scale  of  0-4.  At  an  AGI  of  2.5  or  higher  significant  adverse 
impacts  on  wild  salmonid  populations  are  likely  to  occur  (Vincent,  2000). 


Table  3.  Average  grades  of  infection  of  sentinel  caged  rainbow  trout  testing  positive  for 
whirling  disease  in  2002. 


Average  Grade 
of  Infection 

No.  of  Sites 

Percent  of  Sites 

Predicted  Salmonid 
Population  Impact 

0-1 

1 

9% 

None 

1 -2 

0 

0 

Minor 

2-2.5 

1 

9% 

Minor 

2.5  - 3 

2 

18% 

Declines  may  occur 

3-4 

7 

64% 

Declines  will  occur 

-13- 


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-14- 


4 


I 

I 

I Sentinel  Cage  Loeations  in  the  Rock  Creek  Drainage  1998-2003 


Upper  Middle  Fork 
Lower  Middle  Fork 
Upper  East  Fork  (at  bridge) 

Lower  East  Fork  (Upper  Forks  Bridge 

Ross  Fork 

West  Fork 

Forks  Bridge 

Watson’s  Bridge 

Bohrnsen’s  Bridge 

Gillie’s  Bridge 

Upper  Willow  Creek 

Stony  Creek 

Windlass  Bridge 

Upper  Puyear  Ranch 

Middle  Puyear  Ranch 

Lower  Puyear  Ranch 

Hogback  Creek 

Camp  Siria  (Hogback  section) 

Fish  & Game 
Valley  of  the  Moon 
Above  Hogback  Creek 
Ranch  Creek 

Middle  East  Fork  (Beaver  Dam) 
Clark’s  Property 

Middle  Fork  (Below  Placer  Creek) 

Middle  Fork  USFS  Bridge  5121 

Butte  Cabin  Creek 

Welcome  Creek 

Gilbert  Creek 

Spring  Creek 


Figure  6.  Rainbow  trout  sentinel  cage  study  locations  in  the  Rock  Creek  drainage 
1998  - 2003,  depicting  the  locations  testing  positive  for  whirling  disease. 


-15- 


CONCLUSIONS 


The  spread  of  whirling  disease  has  undoubtedly  been  enhanced  by  chronic  drought  and 
low  stream  flows  in  Rock  Creek  during  the  17  year  period  from  1987  through  2003,  and  by  the 
significant  warming  of  water  temperatures  in  Rock  Creek  observed  between  1972  and  2001. 
Dramatic  declines  in  catchable  and  large  rainbow  trout  in  the  Fish  and  Game  and  Hogback 
Sections  are  attributable  to  this  combination  of  low  stream  flows,  higher  water  temperature  and 
the  spread  of  whirling  disease. 

Chronic  drought  and  higher  water  temperatures  have  probably  also  been  factors  in  the 
declines  of  westslope  cutthroat  trout  and  bull  trout  in  Rock  Creek.  It  appears  the  recovery  of 
westslope  cutthroat  trout  after  restrictive  regulations  were  implemented  in  May,  1979,  was  short 
lived.  Westslope  cutthroat  trout  peaked  in  density  in  fall,  1981,  in  the  Fish  and  Game  Section  and 
in  fall,  1 982,  in  the  Hogback  Section  and  have  generally  declined  or  been  unestimable  since  that 
time.  Increased  angling  pressure  since  1982  and  the  onset  of  whirling  disease  in  the  1990's  may 
also  have  affected  westslope  cutthroat. 

Bull  trout  have  not  been  estimable  in  the  Fish  and  Game  Section  since  1986  and  in  the 
Hogback  Section  since  1993.  Low  flow  and  elevated  water  temperature  have  undoubtedly 
impaired  bull  trout.  Bull  trout  are  generally  recognized  as  being  more  vulnerable  to  drought  and 
increased  water  temperature  than  other  trout  species.  Additional  perspectives  on  the  status  of 
bull  trout  in  the  Rock  Creek  drainage  are  available  through  redd  counts  obtained  in  spawning 
areas.  These  findings  are  presented  in  the  following  section. 


Bull  Trout  Red  Counts 

USFS  biologists,  Steve  Gerdes  and  Shane  Hendrickson,  have  spent  considerable  time  and 
effort  m locating  and  counting  bull  trout  redds  in  the  Rock  Creek  drainage.  These  efforts  have 
helped  to  identify  critical  bull  trout  spawning  areas  in  drainage.  Since  the  counts  have  been  made 
for  an  1 1 year  period  from  1993  through  2003,  they  are  also  useful  in  helping  to  determine  trends 
in  bull  trout  status  and  abundance  in  the  drainage. 

In  the  Deer  Lodge  Forest  segment  of  the  drainage,  redd  surveys  to  date  have  identified  six 
important  bull  trout  spawning  tributaries.  These  tributaries  are  Stony,  Copper,  Little  Stony,  Ross 
Fork,  Carpp  and  Middle  Fork  Rock  Creeks.  Although  redd  counts  have  been  variable  from  year 
to  year,  redd  counts  in  Stony,  Carpp,  Copper  and  Middle  Fork  Rock  Creeks  have  usually  been 
relatively  higher  than  redd  counts  in  Little  Stony  and  Ross  Fork  Creeks  (Figure  7 and  Appendix 
1).  Carpp  and  Copper  Creeks  are  tributaries  of  Middle  Fork  Rock  Creek  while  Little  Stony 
Creek  is  a tributary  of  Stony  Creek.  This  emphasizes  the  importance  of  the  Stony  Creek  and 
Middle  Fork  Rock  Creek  drainages  for  buU  trout  spawning.  Redd  counts  in  Stony,  Copper,  Ross 
Fork,  Carpp  and  Middle  Fork  Roek  Creeks  peaked  in  1998  and  have  generally  declined  since 
then.  Stream  flow  measurements  in  Middle  Fork  Rock  Creek  have  declined  by  about  a third  since 
1998,  suggesting  reduced  redd  counts  may  be  correlated  with  reduced  stream  flow  in  the 


-16- 


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Figure  7.  BulS  trout  redd  counts  in  six  critical  spawning  tributaries  of 
Rock  Creek,  1993  - 2003. 


year  1993  1994  1995  1996  1997  1998  1999  2000  2001  2002  2003 

redds  25  30  36  48  60  112  69  72  63  55  38 

flow  68  38  65  53  58  58  46  40  38  41  38 

temp  cop  8.8  11.1  10.5  11.1  6.7  10.5  9.2 

tempmfk  6.6  7.8  8.4  10.8  10.3  6 9.2  7.2 


-18- 


Figure  8.  The  correlations  of  stream  flow  and  water  temperature  with  redd  counts  i 
Middle  Fork  Rock  Creek  and  two  of  its  tributaries,  1993  - 2003. 


f ^ 


spawning  tributaries  (Figure  8). 

East  Fork  Rock  Creek  Reservoir  Fishery  survey 

East  Fork  Rock  Creek  Reservoir  is  the  largest  body  of  standing  water  in  the  Rock  Creek 
drainage.  An  important  adfluvial  population  of  bull  trout  is  found  in  the  reservoir  along  with  a 
few  brook  and  rainbow  trout. 

Adfluvial  bull  trout  survival  is  jeopardized  in  the  reservoir  due,  in  part,  to  aggradation  of 
the  stream  bed  upstream  of  the  reservoir  which  historically  has  been  used  by  bull  trout  for 
spawning.  In  addition.  East  Fork  Reservoir  is  drawn  down  significantly  each  year  during  the 
irrigation  season  resulting  in  the  movement  of  some  fish  through  the  dam  outlet  and  into  East 
Fork  Rock  Creek  downstream  of  the  reservoir.  Since  most  of  the  water  in  the  East  Fork  enters 
an  irrigation  diversion  during  the  irrigation  season,  many  bull  trout  are  lost  to  the  diversion. 
Ultimately,  much  of  the  water  in  the  irrigation  diversion  is  siphoned  into  an  irrigation  canal 
transferring  water  to  the  Flint  Creek  drainage.  This  results  in  the  transfer  of  at  least  some  bull 
trout  from  the  Rock  Creek  drainage  to  the  Fhnt  Creek  drainage  where  their  fate  is  uncertain  at 
best. 


A fishery  survey  of  East  Fork  Rock  Creek  Reservoir  was  made  in  2003  to  evaluate  present 
day  status  of  buU,  brook  and  rainbow  trout.  Five  overnight  gill  net  sets  were  made  each  night 
from  June  27  to  July  1,  2003.  The  25  total  overnight  giU  net  catch  produced  a total  of  48  bull,  28 
rainbow  and  7 brook  trout.  No  other  game  or  nongame  fish  were  captured. 

Six  of  15  mature  female  bull  trout  examined,  or  40  percent,  were  reabsorbing  eggs  from 
the  previous  year,  while  forming  new  eggs  in  the  abdominal  cavity  adjacent  to  the  previous  year’s 
egg  production.  This  finding  confirms  a high  percentage  of  adfluvial  buU  trout  in  East  Fork 
Reservoir  are  unable  to  successfully  spawn.  Poor  spawning  success  and  the  loss  of  fish  to  the 
diversion  ditch  during  the  irrigation  period  have  imperiled  this  bull  trout  population. 

USFS  intends  to  employ  low  tech  habitat  improvements  in  the  East  Fork  of  Rock  Creek 
upstream  of  the  reservoir  in  an  attempt  to  restore  some  surface  water  for  bull  trout  spawning 
(Steve  Gerdes,  USFS,  2004,  personal  communication).  Since  the  bedload  deposition  is  so 
extensive,  its  uncertain  whether  these  improvements  will  be  successful  without  physical  removal 
or  bypass  of  some  of  the  bedload  material. 

The  siphon  in  the  irrigation  canal  downstream  of  East  Fork  Reservoir  is  in  need  of 
replacement.  Fish  screens  at  the  water  outlet  works  in  the  reservoir  and  screens  at  the  diversion 
site  downstream  of  the  reservoir  will  be  evaluated  and  probably  employed  as  part  of  the  siphon 
replacement  funding  to  mitigate  and  minimize  bull  trout  loss  to  irrigation  diversion. 

East  Fork  Rock  Creek  Reservoir  was  planted  annually  with  hatchery  rainbow  trout  for  47 
years  from  1938  through  1984.  For  the  first  24  years  from  1938  through  1961  the  plant  consisted 
of  fingerling  rainbow,  one  to  six  inches  in  length.  For  23  years  from  1962  through  1984  catchable 
rainbow,  7 to  10  inches  in  length  were  planted.  The  plant  was  discontinued  after  1984  due  to  the 


-19- 


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assumption  that  too  many  fish  were  flushed  from  the  reservoir  during  irrigation  drawdown. 
However,  this  assumption  was  never  validated  by  objective  field  observation. 

Since  rainbow  trout  still  persist  in  the  reservoir  20  years  after  planting  ceased,  it  is  clear 
some  self  sustaining  natural  reproduction  of  rainbow  occurs.  However,  since  rainbow  and  brook 
trout  are  scarce  compared  to  bull  trout,  it  is  recommended  that  hatchery  supplementation  should 
be  resumed  to  provide  enhancement  of  angler  catch  and  to  reduce  angling  pressure  on  bull  trout. 
Fingerling  or  catchable  rainbow  or  cutthroat  should  be  planted  to  evaluate  escapement  through 
the  dam  outlet  works  and  to  determine  their  relative  value  in  improving  the  fishery.  Once  it  is 
determined  which  species  and  size  of  fish  are  relatively  less  vulnerable  to  flushing,  objective 
judgements  can  be  made  with  regard  to  whether  hatchery  supplementation  should  be  continued  as 
a management  tool. 

Electro  fishing  studies  should  be  conducted  in  East  Fork  Rock  Creek  upstream  of  the 
reservoir  to  evaluate  the  status  of  bull  trout,  and  to  determine  whether  rainbow,  cutthroat  or 
brook  trout  are  present  upstream  of  the  reservoir.  East  Fork  Rock  Creek  and  East  Fork 
Reservoir  provide  considerable  opportunity  for  habitat  and  trout  population  improvement. 


-20- 


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BIBLIOGRAPHY 


Vincent,  E.  R.  2000.  Whirling  disease  report  1997-98.  Montana  FWP.  33  pp. 


-21- 


APPENDIX  1 

Bull  Trout  Redd  Counts  in  Spawning 
Tributaries  of  Rock  Creek 
1993-2003 


-22- 


Reach#  1993  1994  1995  1996  1997  1998  1999  2000  2001  2002  2003 


(M  O)  CO  LO 


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Reach#  1993  1994  1995  1996  1997  1998  1999  2000  2001  2002  2003 


cvi  m 


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CD  00  to 


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Reach  #5 


1997 

3 


1998 

19 


1999 

6 


2000 

4 


2003 

7 


Ross  Fork  Rock  Cr 


20 

18 

16 

14 

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^ ft 
6 
4 
2 
0 


1997  1998  1999  2000  2001  2002  2003 


□ Reach  ^ 


Survey  Year 


-27- 


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